Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g075840.3.1
CDS Infomation	Replication protein A DNA-binding subunit (AHRD V3.3 *** A0A1D1XHA3_9ARAE)
Sequence	ATGCCGCCGATTAACTTGACGGAAGGAGCAGTAGAGATGCTATCGATCGGAGAAGGTCAT CCCGAGGAGTTTAAACCGGTGCTACAGATCACAGATGTTCGGTTGGTGAATACTCAGAAT CAGACTAACAATAATGAACGATACCGGCTTTTGTTATCGGACGGAACGCATATTCAGCAA GGAATGTTAGCTACGCAGAAGAACGATCTAATTCGGTCTCAACAGATTCGGAAAGGAACT ATTATTCAGATGAATGAGTTCGTTCGTAATGTCATCCAGAATCGAGTGATCATCATTATT ATCGAATTAGATATTTTAGTTGACACGTGTGATCAAATTGGAGACCCAAAGCATTATGTC AGAACTGATGGTAGTGCTCCTTCGGTGCCACGACCAGCTGCCCCACTGCAGCCTTCCACC AATCAATTAGGTGGTGTAAGTGTAAACCCCCAATCATTTGCTTCTCTTTCTGCTACTTCA GGCTCAACTCCAAGACCAAATATGTCAGGAGGAATGCAATCTCCAGAGATGAACCGTAGC AGTGTTTACAATACTACCTCTGTTGGGAATACTGACTCTGGACGATATAGTTCAGGTGCA CCTCTTTACCCTAGAGCAGAATCTGGTCCTGCAATTTCACGGGCTCCGATGAATTATGTG CGTCCACCTCAGCCTTCTTATCAACAGCCTCCTCAGTCTTCTTATCAGCAGCCATCACCA ATGTACTCGAACAGAGGACCTATAGCCAAGAATGAAGCACCTCCAAGGATTGTTCCAATT GCTGCTCTCAATCCATATCAGGGTCGGTGGACTATCAAGGCCAGGGTAACCGCAAAGACA GAACTCAGACACTACAACAATCAAAGGGGTGATGGAAAAGTATTCTCTTTTGATCTTCTT GATTCTGATGGAGGAGAAATAAGGGTGACTTGTTTTAACTCTGTAGCTGACCAATTTTAT GACCAGATTGAGCCAGGTAGAGTGTATCAAATTTCAAAAGGAAGCTTGAAACCAGCTCAA AAAAATTACAATCACCTTCCAAATGACCATGAAATTATGCTCGAGAGCACGTCTGTCGTT CAACCTTGTTTTGAGGATGACAGGGCTATTCCTCAGCAGCAATTTCATTTTCGGCCAATC AGTGACATTGAAGCCACGGAGAACAATAATGTGATAGATGTGATTGGTGTGGTGTCTTCA ATAAGTCCATCTAGTTCAATAATGAGGAAAAATGGTACAGAAACTCAGAAGAGAGTCCTC CAGCTGAAGGACATGTCTGGTAGAAGTATTGAAGTAACTTTGTGGGGAAATTTTTGCAAT GCAGAAGGTCAAACACTTCAGAGTTTGTGTGATTCTGGGTCTTTCCCTGTCTTGGCAGTT AAAGCTGGTAGAGTAAATGATTTTAATGGAAAATCTATAGGTACTATATCTACAAGCAAA TTGTTTATAGAACCAGATTTTCCTGAAGCTCTGAAAACAAAGGCATGGTTTGAAAGGGAG GGAAAGAACATGCCATCTATGTCATTGTCACGAGAAGTGAGCAGTGTTGGTCGGACAGAT GTGCGGAAGACAATATCTCAAATCAAAGATGAGAAGTTGGGCACTTCTGAGAAACCAGAT TGGATCACTATAAGTGCCACTGTTACATTTATAAAAGTTGACAATTTTTGCTATACTGCA TGTCCCCTCATGATAGGAGATAGACAGTGCAACAAAAAAGTGACAAATAATGGGGATGGG AAATGGCGGTGTGACAGGTGTGATCAGACTGTTGATGAATGTGAATACAGGTACATACTT CAGTTCCAGATTCAGGACCATACTGGCTTAACATGGGTTACTGCATTTCAAGAATGTGGT GACCAGATAATGGGTGCATCTGCAAAAGAATTGTATTTCTTAAAATATGAGGAGCAGGAT GATGATAGGTTTGCAGAAATCATGCGTAATGTGTTATTCAACCAGTTTATATTTAAATTG AAAGTGAAAGAAGAGATGTATAGTGATGAGCAGCGTGTTAAGTCAACAGTGGTCAAAGCT GAGATGCTTAACTTCCAACAAGAGACCAGGTTTCTGTTCGACCTGATAAACAAGATTAAT GGGCAGGAATCCAGCACTTTAACTCCTAAGACAGGTGATGCAACTCCAAATTCAGGGTTT AATAATGCTGGATTTGGGAATAAACTGAAAGAACCAATGAACCCTGTTGCAAGTTATGGT GGCAGCCATATCAGCAGAGATAGTGGACTGCAGGGAAATCGGCAAGGTCCATATGGGAAT CAGCTTATTGGCTCACAGTTTGCTCCTTCTGGCTCTACTGCAGGCAGTATCAGCAGAGAA AGTGGACTGCAGGGAAATCGGCAAGGCCAATATGGAAATCAGCCTAGTGGAACGCAAAAT GCTCCGACTGGCTCTTCTGCAGGCATGTATATGAGCTGTAATAGTTGTGGTGGAACAGGT CATAGTGCTTCAAACTGTCCAAGCATGATGAGTGGTCAGAGCCAGGCATATGGAAGTGGT TTTGGCAATAGGGCAACTTCAGGGATGAGCAGTGGTGGTGGTGGTGGTGAGTGTTATAAA TGCCATCAGTATGGACATTGGGCAAGAGATTGCCCAGGTGTAAGCAATGCACCTGCTGCC AATAACATGACATCAGGAAGATATGGGAATACTCCAAGGCAACACGTTGGTGGTTTTTGA

Peptide Sequence

PEP ID	Solyc08g075840.3.1
PEP Infomation	Replication protein A DNA-binding subunit (AHRD V3.3 *** A0A1D1XHA3_9ARAE)
Sequence	MPPINLTEGAVEMLSIGEGHPEEFKPVLQITDVRLVNTQNQTNNNERYRLLLSDGTHIQQ GMLATQKNDLIRSQQIRKGTIIQMNEFVRNVIQNRVIIIIIELDILVDTCDQIGDPKHYV RTDGSAPSVPRPAAPLQPSTNQLGGVSVNPQSFASLSATSGSTPRPNMSGGMQSPEMNRS SVYNTTSVGNTDSGRYSSGAPLYPRAESGPAISRAPMNYVRPPQPSYQQPPQSSYQQPSP MYSNRGPIAKNEAPPRIVPIAALNPYQGRWTIKARVTAKTELRHYNNQRGDGKVFSFDLL DSDGGEIRVTCFNSVADQFYDQIEPGRVYQISKGSLKPAQKNYNHLPNDHEIMLESTSVV QPCFEDDRAIPQQQFHFRPISDIEATENNNVIDVIGVVSSISPSSSIMRKNGTETQKRVL QLKDMSGRSIEVTLWGNFCNAEGQTLQSLCDSGSFPVLAVKAGRVNDFNGKSIGTISTSK LFIEPDFPEALKTKAWFEREGKNMPSMSLSREVSSVGRTDVRKTISQIKDEKLGTSEKPD WITISATVTFIKVDNFCYTACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYIL QFQIQDHTGLTWVTAFQECGDQIMGASAKELYFLKYEEQDDDRFAEIMRNVLFNQFIFKL KVKEEMYSDEQRVKSTVVKAEMLNFQQETRFLFDLINKINGQESSTLTPKTGDATPNSGF NNAGFGNKLKEPMNPVASYGGSHISRDSGLQGNRQGPYGNQLIGSQFAPSGSTAGSISRE SGLQGNRQGQYGNQPSGTQNAPTGSSAGMYMSCNSCGGTGHSASNCPSMMSGQSQAYGSG FGNRATSGMSSGGGGGECYKCHQYGHWARDCPGVSNAPAANNMTSGRYGNTPRQHVGGF*

Transcript Sequence

Transcript ID	Solyc08g075840.3.1
Transcript Infomation	Replication protein A DNA-binding subunit (AHRD V3.3 *** A0A1D1XHA3_9ARAE)
Sequence	AAAGATTTTTACTTATTTTCGTTTTCGCGCCCGCTCAGTGTTATCCCGCTTCCTCTTTTT AGGGTTTTGAAACCCTCTTCCCCATTTCACTTTCACTTTCTCGAGGAAAAAACCGTCGTA ATTTCGCCGGAAAAATGCCGCCGATTAACTTGACGGAAGGAGCAGTAGAGATGCTATCGA TCGGAGAAGGTCATCCCGAGGAGTTTAAACCGGTGCTACAGATCACAGATGTTCGGTTGG TGAATACTCAGAATCAGACTAACAATAATGAACGATACCGGCTTTTGTTATCGGACGGAA CGCATATTCAGCAAGGAATGTTAGCTACGCAGAAGAACGATCTAATTCGGTCTCAACAGA TTCGGAAAGGAACTATTATTCAGATGAATGAGTTCGTTCGTAATGTCATCCAGAATCGAG TGATCATCATTATTATCGAATTAGATATTTTAGTTGACACGTGTGATCAAATTGGAGACC CAAAGCATTATGTCAGAACTGATGGTAGTGCTCCTTCGGTGCCACGACCAGCTGCCCCAC TGCAGCCTTCCACCAATCAATTAGGTGGTGTAAGTGTAAACCCCCAATCATTTGCTTCTC TTTCTGCTACTTCAGGCTCAACTCCAAGACCAAATATGTCAGGAGGAATGCAATCTCCAG AGATGAACCGTAGCAGTGTTTACAATACTACCTCTGTTGGGAATACTGACTCTGGACGAT ATAGTTCAGGTGCACCTCTTTACCCTAGAGCAGAATCTGGTCCTGCAATTTCACGGGCTC CGATGAATTATGTGCGTCCACCTCAGCCTTCTTATCAACAGCCTCCTCAGTCTTCTTATC AGCAGCCATCACCAATGTACTCGAACAGAGGACCTATAGCCAAGAATGAAGCACCTCCAA GGATTGTTCCAATTGCTGCTCTCAATCCATATCAGGGTCGGTGGACTATCAAGGCCAGGG TAACCGCAAAGACAGAACTCAGACACTACAACAATCAAAGGGGTGATGGAAAAGTATTCT CTTTTGATCTTCTTGATTCTGATGGAGGAGAAATAAGGGTGACTTGTTTTAACTCTGTAG CTGACCAATTTTATGACCAGATTGAGCCAGGTAGAGTGTATCAAATTTCAAAAGGAAGCT TGAAACCAGCTCAAAAAAATTACAATCACCTTCCAAATGACCATGAAATTATGCTCGAGA GCACGTCTGTCGTTCAACCTTGTTTTGAGGATGACAGGGCTATTCCTCAGCAGCAATTTC ATTTTCGGCCAATCAGTGACATTGAAGCCACGGAGAACAATAATGTGATAGATGTGATTG GTGTGGTGTCTTCAATAAGTCCATCTAGTTCAATAATGAGGAAAAATGGTACAGAAACTC AGAAGAGAGTCCTCCAGCTGAAGGACATGTCTGGTAGAAGTATTGAAGTAACTTTGTGGG GAAATTTTTGCAATGCAGAAGGTCAAACACTTCAGAGTTTGTGTGATTCTGGGTCTTTCC CTGTCTTGGCAGTTAAAGCTGGTAGAGTAAATGATTTTAATGGAAAATCTATAGGTACTA TATCTACAAGCAAATTGTTTATAGAACCAGATTTTCCTGAAGCTCTGAAAACAAAGGCAT GGTTTGAAAGGGAGGGAAAGAACATGCCATCTATGTCATTGTCACGAGAAGTGAGCAGTG TTGGTCGGACAGATGTGCGGAAGACAATATCTCAAATCAAAGATGAGAAGTTGGGCACTT CTGAGAAACCAGATTGGATCACTATAAGTGCCACTGTTACATTTATAAAAGTTGACAATT TTTGCTATACTGCATGTCCCCTCATGATAGGAGATAGACAGTGCAACAAAAAAGTGACAA ATAATGGGGATGGGAAATGGCGGTGTGACAGGTGTGATCAGACTGTTGATGAATGTGAAT ACAGGTACATACTTCAGTTCCAGATTCAGGACCATACTGGCTTAACATGGGTTACTGCAT TTCAAGAATGTGGTGACCAGATAATGGGTGCATCTGCAAAAGAATTGTATTTCTTAAAAT ATGAGGAGCAGGATGATGATAGGTTTGCAGAAATCATGCGTAATGTGTTATTCAACCAGT TTATATTTAAATTGAAAGTGAAAGAAGAGATGTATAGTGATGAGCAGCGTGTTAAGTCAA CAGTGGTCAAAGCTGAGATGCTTAACTTCCAACAAGAGACCAGGTTTCTGTTCGACCTGA TAAACAAGATTAATGGGCAGGAATCCAGCACTTTAACTCCTAAGACAGGTGATGCAACTC CAAATTCAGGGTTTAATAATGCTGGATTTGGGAATAAACTGAAAGAACCAATGAACCCTG TTGCAAGTTATGGTGGCAGCCATATCAGCAGAGATAGTGGACTGCAGGGAAATCGGCAAG GTCCATATGGGAATCAGCTTATTGGCTCACAGTTTGCTCCTTCTGGCTCTACTGCAGGCA GTATCAGCAGAGAAAGTGGACTGCAGGGAAATCGGCAAGGCCAATATGGAAATCAGCCTA GTGGAACGCAAAATGCTCCGACTGGCTCTTCTGCAGGCATGTATATGAGCTGTAATAGTT GTGGTGGAACAGGTCATAGTGCTTCAAACTGTCCAAGCATGATGAGTGGTCAGAGCCAGG CATATGGAAGTGGTTTTGGCAATAGGGCAACTTCAGGGATGAGCAGTGGTGGTGGTGGTG GTGAGTGTTATAAATGCCATCAGTATGGACATTGGGCAAGAGATTGCCCAGGTGTAAGCA ATGCACCTGCTGCCAATAACATGACATCAGGAAGATATGGGAATACTCCAAGGCAACACG TTGGTGGTTTTTGATGAACCTTTGAGCACATAAAGTTGTCCTGTACAGGTTTAGATGTCT TCTCTTAGTGGCTCATCATGGCTCATGTTCTGCTTTTGAGAAAGCTTCTTGAGGGGCTTG CGTTTTGCCTTTCTGTACAGTGGTCGCTTGGGGCTTAAATTATGCATCACGGCTCCTGGA CGGGAGTGCACTACAAGTCTTGTCGTCCATGTTTTGAGGAGTGACGTTTCGTTGCTCTTT CTTTGTAAATTGTAGTCTTGCATTATCATCTCTTTTCGTCTCTTCTTTTTGAGTTCTTTT AGGTAATCTTTCGTTGTGGTTTCGACCCTTTAAGATAAAAACTCGTGTGTTACAGTTCAG ACTGACATGTTTATGTTGTCACATCTTTTTCATTTGTCACATGTCATCTTTATTTATTCG CTACGTAATATTCCCTCTTTGTTCAAATAAGTTATTTTGTTT