Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc07g049720.3.1 |
| PEP | Solyc07g049720.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch07 | |
| Start Position | 60189168 | ||
| End Position | 60200061 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00231531 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | DNA topoisomerase I |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | DNA topoisomerase I |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF01028,PF14370,PF02919 |
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| Pfam Description | Details | ||
| InterPro ID | IPR013500,IPR013499,IPR014727,IPR036202,IPR013034,IPR013030,IPR011010,IPR008336,IPR025834,IPR018521,IPR014711,IPR001631 |
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| InterPro Description | Details | ||
| GO ID | GO:0007059,GO:0006260,GO:0003917,GO:0006265,GO:0031298,GO:0005730,GO:0006338,GO:0003677 |
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| GO Description | Details | ||
| GOslim ID | GO:0003676,GO:0006259,GO:0016853,GO:0000808,GO:0051276,GO:0005730,GO:0006260,GO:0032993,GO:0007059,GO:0005634 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
