Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g049720.3.1
CDS Infomation	10kDa polypeptide precursor of photosystem 2
Sequence	ATGGCTGTAGAGGCTTTTGCCAAAACAAATTTGATGGAAGATATGGATGATGACGATGAC ATGCCTTTAGTTTTCAAACGAAGTAGTACCACATCAAAGCAAAATCAGTCCAATTCATCA TCTCAGAAGCAGGATGGAAGATCGGGGCGGCAAGTTCCTGATATACGTTCACCTAATGGC CAGAGCTCTAGTACTCATAAAGTTAAGACAGTCACCTCTTCTAAGGCATCTCCAGCAGTT TCACCTTTAACTAGTCCAAAAGCGTCGCCTCTGTCAAGCAGGACATCTCCTGCACCAAAC TCAAGGCCGTCATCTTCTGCAGGTAATCAGGCAAAAAATGTTAATCAACAATCCAATGTT ACTCCTAAGGAGTCGAAACAAGCTGTTGAACCAAAATCTGAACCTAATGATGAAGCTGAG GATTCTGATGATGATAAACTATTGAGTTCTAGGGTCCCTTCTGGGTTATCTAAGAGCACT TCTGTTCATGCCAAGAAAGTGCTTTGTACTTCAACATCAGTTCAGAAGTCTAGACCTCCC AAAAAAGAGGATTCAGATGATGAAACTCCCTTAGCATCAAGGTTTCCAATGAAATCCAAT GCAGGGGCTTCCACTAGCAAGTTTTCTAGTTCTGAAGAAGTTAAGCCTAAGATTCGTCAG AATGGTTTGCCATCTGCGACAGTTTTAAGTAAGAGACCCCCTGGTGAGGTCAAGTCTGCT GCTCAGGCTTCAGTTAAAAAGCCTAGACTTTCTGATGCGTCCACACCTGTTTCTAGTAAG CAACCGCCTTTCAAAACTGAAAAGAAGACAGAGGACGATGACGACGATGTTCCTATATCT CAGAGGATAAAAAAGGCAGTAGATTCAGCTTCAGCTTCAGCTAGTAAAGTGTCATATGTG AAGAAAGCAACTAAAGTTGTTTCGTCATCGATGAAGAAAACAAAGAAGAAGTTGAAAAAA CCCAAGTACTCTAAGTCGTCAAAACTGCAGCCAAGCTCTGGTGATGGGCAAAAATGGACT ACACTGGAACACAATGGTGTGATTTTTCCACCTCCATACAAACCTCATGGGGTTAAGATG CTCTACAAGGGAAAGCCCGTGGATCTTACTCCAGAGCAGGAAGAGGTCGCAACAATGTAT GCCGTGATGTTAGACACTGAATACATGACTAAAGAGCAGTTCAAAGAGAATTTCATGAAT GACTGGAGAAAAATACTTGGAAAAAACCATGTCATTCAAAAGTTAGAAGAGTGTGATTTT ACCCCAATATATGAGTGGCATCAGAGTGAGAAGGAGAAGAAGAAGCAAATGAGTTCAGAA GAGAAGAAGGCATTGAGAGAAGAGAAACTTAAGCAAGAAGAGAAATACATGTGGGCTATT GTGGATGGTGTTAAAGAGAAGGTTGGGAACTTTCGGGTTGAACCACCTGGATTGTTCCGA GGCCGTGGGGAACATCCAAAGATGGGAAAGCTAAAGAGACGGATCCGGCCAAATGATATC ACAATAAATATTGGAAAGGGTGTTCCAGTACCGGAGTGCCCCATCCCTGGCCAAAGGTGG AAGGAAGTAAGGCATGACAACACAGTAACATGGTTAGCTTTCTGGAACGACCCTATTAAT CCAAGAGAATTCAAATACGTTTTCCTAGCAGCCAGTAGTTCCTTGAAAGGGCAAAGTGAT AAGGAGAAGTATGAGAAAGCTAGGCGTTTGAAGGATTACATAGAAGGCATTAGATCTGCA TATACAAAAGATTTTGCAAGTAAAGATCCTGTGAAGCGTCAGATTGCAGTTGCAACTTAT CTTATCGATAAATTAGCTCTGAGGGCAGGGAATGAGAAGGATGATGACGAAGCTGATACA GTTGGTTGCTGTACTTTGAAAGTAGAGAATGTAGAGCCAGTACCTCCAAATATTTTGAAG TTCGATTTTCTTGGTAAAGATTCTATCAGGTACCAAAATGAGGTGGCTGTGTATGAGCCT GTTTTTAAAGCTATTCAACAGTTCCGAAGTGGAAAAAAGGGCAGTGACGATCTTTTTGAC AAGCTTGATACGAGTAAGCTTAATGCCCATCTAAAGGAACTCATGCCAGGGCTCACAGCA AAAGTATTTCGTACATATAATGCATCTTTTACATTGGAGCAGCAATTGACTAAGCTCACA CAAGGGGGGGAGCTTGCTGATAAAATTGCGGTATATAATGTGGCAAATAAAGAGGTTGCA ATAATTTGTAATCACCAGCGTACTGTCTCGAAGTCCCATAGCGTGCAAATTTCAAGGTTG AATAACAAGATAGATGAGTTAAAGGCTATTTTGGAAGAATTCAAAGTAGATTTGGCTCGG GCCAAAAAAGGGAAGCCTCCGGTGAAAGGCGCCGATGGCAAGGCGAAGAGGAACTTGACC CCTCAAGCATTACAGATAAAAATAGACCAAACTAATGTGAAGATTGATAACATAGAGAGG CAAATAGATACTAAAGAAGAGTTGAAAACTGTGGCTTTGGGCACATCAAAAATCAACTAT TTGGATCCTAGGATTACTGTGGCATGGTGTAAGCGCCATGAGGTTCCCATTGAAAAGATG TTCAACAAGTCTCTTCTAGCAAAGTTTGCCTGGGCGATGGATGTTGAACCTTCCTTCACA TTCTAA

Peptide Sequence

PEP ID	Solyc07g049720.3.1
PEP Infomation	10kDa polypeptide precursor of photosystem 2
Sequence	MAVEAFAKTNLMEDMDDDDDMPLVFKRSSTTSKQNQSNSSSQKQDGRSGRQVPDIRSPNG QSSSTHKVKTVTSSKASPAVSPLTSPKASPLSSRTSPAPNSRPSSSAGNQAKNVNQQSNV TPKESKQAVEPKSEPNDEAEDSDDDKLLSSRVPSGLSKSTSVHAKKVLCTSTSVQKSRPP KKEDSDDETPLASRFPMKSNAGASTSKFSSSEEVKPKIRQNGLPSATVLSKRPPGEVKSA AQASVKKPRLSDASTPVSSKQPPFKTEKKTEDDDDDVPISQRIKKAVDSASASASKVSYV KKATKVVSSSMKKTKKKLKKPKYSKSSKLQPSSGDGQKWTTLEHNGVIFPPPYKPHGVKM LYKGKPVDLTPEQEEVATMYAVMLDTEYMTKEQFKENFMNDWRKILGKNHVIQKLEECDF TPIYEWHQSEKEKKKQMSSEEKKALREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFR GRGEHPKMGKLKRRIRPNDITINIGKGVPVPECPIPGQRWKEVRHDNTVTWLAFWNDPIN PREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSAYTKDFASKDPVKRQIAVATY LIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEP VFKAIQQFRSGKKGSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASFTLEQQLTKLT QGGELADKIAVYNVANKEVAIICNHQRTVSKSHSVQISRLNNKIDELKAILEEFKVDLAR AKKGKPPVKGADGKAKRNLTPQALQIKIDQTNVKIDNIERQIDTKEELKTVALGTSKINY LDPRITVAWCKRHEVPIEKMFNKSLLAKFAWAMDVEPSFTF*

Transcript Sequence

Transcript ID	Solyc07g049720.3.1
Transcript Infomation	10kDa polypeptide precursor of photosystem 2
Sequence	GAAATTGGAATGTCGATTTCTTCGGCCATTACCATTGAATGACCACCACTCTTCCTCGCC TACGAACTTCCTCATCCCCATTCTCCTCCTCCTTCCGATCTCTTTCTCCGGCCAAATTCA TCTCCATAAAGGAGAACATTATATGACAGTATAGCATAGAGAAAGATCATGGCTGTAGAG GCTTTTGCCAAAACAAATTTGATGGAAGATATGGATGATGACGATGACATGCCTTTAGTT TTCAAACGAAGTAGTACCACATCAAAGCAAAATCAGTCCAATTCATCATCTCAGAAGCAG GATGGAAGATCGGGGCGGCAAGTTCCTGATATACGTTCACCTAATGGCCAGAGCTCTAGT ACTCATAAAGTTAAGACAGTCACCTCTTCTAAGGCATCTCCAGCAGTTTCACCTTTAACT AGTCCAAAAGCGTCGCCTCTGTCAAGCAGGACATCTCCTGCACCAAACTCAAGGCCGTCA TCTTCTGCAGGTAATCAGGCAAAAAATGTTAATCAACAATCCAATGTTACTCCTAAGGAG TCGAAACAAGCTGTTGAACCAAAATCTGAACCTAATGATGAAGCTGAGGATTCTGATGAT GATAAACTATTGAGTTCTAGGGTCCCTTCTGGGTTATCTAAGAGCACTTCTGTTCATGCC AAGAAAGTGCTTTGTACTTCAACATCAGTTCAGAAGTCTAGACCTCCCAAAAAAGAGGAT TCAGATGATGAAACTCCCTTAGCATCAAGGTTTCCAATGAAATCCAATGCAGGGGCTTCC ACTAGCAAGTTTTCTAGTTCTGAAGAAGTTAAGCCTAAGATTCGTCAGAATGGTTTGCCA TCTGCGACAGTTTTAAGTAAGAGACCCCCTGGTGAGGTCAAGTCTGCTGCTCAGGCTTCA GTTAAAAAGCCTAGACTTTCTGATGCGTCCACACCTGTTTCTAGTAAGCAACCGCCTTTC AAAACTGAAAAGAAGACAGAGGACGATGACGACGATGTTCCTATATCTCAGAGGATAAAA AAGGCAGTAGATTCAGCTTCAGCTTCAGCTAGTAAAGTGTCATATGTGAAGAAAGCAACT AAAGTTGTTTCGTCATCGATGAAGAAAACAAAGAAGAAGTTGAAAAAACCCAAGTACTCT AAGTCGTCAAAACTGCAGCCAAGCTCTGGTGATGGGCAAAAATGGACTACACTGGAACAC AATGGTGTGATTTTTCCACCTCCATACAAACCTCATGGGGTTAAGATGCTCTACAAGGGA AAGCCCGTGGATCTTACTCCAGAGCAGGAAGAGGTCGCAACAATGTATGCCGTGATGTTA GACACTGAATACATGACTAAAGAGCAGTTCAAAGAGAATTTCATGAATGACTGGAGAAAA ATACTTGGAAAAAACCATGTCATTCAAAAGTTAGAAGAGTGTGATTTTACCCCAATATAT GAGTGGCATCAGAGTGAGAAGGAGAAGAAGAAGCAAATGAGTTCAGAAGAGAAGAAGGCA TTGAGAGAAGAGAAACTTAAGCAAGAAGAGAAATACATGTGGGCTATTGTGGATGGTGTT AAAGAGAAGGTTGGGAACTTTCGGGTTGAACCACCTGGATTGTTCCGAGGCCGTGGGGAA CATCCAAAGATGGGAAAGCTAAAGAGACGGATCCGGCCAAATGATATCACAATAAATATT GGAAAGGGTGTTCCAGTACCGGAGTGCCCCATCCCTGGCCAAAGGTGGAAGGAAGTAAGG CATGACAACACAGTAACATGGTTAGCTTTCTGGAACGACCCTATTAATCCAAGAGAATTC AAATACGTTTTCCTAGCAGCCAGTAGTTCCTTGAAAGGGCAAAGTGATAAGGAGAAGTAT GAGAAAGCTAGGCGTTTGAAGGATTACATAGAAGGCATTAGATCTGCATATACAAAAGAT TTTGCAAGTAAAGATCCTGTGAAGCGTCAGATTGCAGTTGCAACTTATCTTATCGATAAA TTAGCTCTGAGGGCAGGGAATGAGAAGGATGATGACGAAGCTGATACAGTTGGTTGCTGT ACTTTGAAAGTAGAGAATGTAGAGCCAGTACCTCCAAATATTTTGAAGTTCGATTTTCTT GGTAAAGATTCTATCAGGTACCAAAATGAGGTGGCTGTGTATGAGCCTGTTTTTAAAGCT ATTCAACAGTTCCGAAGTGGAAAAAAGGGCAGTGACGATCTTTTTGACAAGCTTGATACG AGTAAGCTTAATGCCCATCTAAAGGAACTCATGCCAGGGCTCACAGCAAAAGTATTTCGT ACATATAATGCATCTTTTACATTGGAGCAGCAATTGACTAAGCTCACACAAGGGGGGGAG CTTGCTGATAAAATTGCGGTATATAATGTGGCAAATAAAGAGGTTGCAATAATTTGTAAT CACCAGCGTACTGTCTCGAAGTCCCATAGCGTGCAAATTTCAAGGTTGAATAACAAGATA GATGAGTTAAAGGCTATTTTGGAAGAATTCAAAGTAGATTTGGCTCGGGCCAAAAAAGGG AAGCCTCCGGTGAAAGGCGCCGATGGCAAGGCGAAGAGGAACTTGACCCCTCAAGCATTA CAGATAAAAATAGACCAAACTAATGTGAAGATTGATAACATAGAGAGGCAAATAGATACT AAAGAAGAGTTGAAAACTGTGGCTTTGGGCACATCAAAAATCAACTATTTGGATCCTAGG ATTACTGTGGCATGGTGTAAGCGCCATGAGGTTCCCATTGAAAAGATGTTCAACAAGTCT CTTCTAGCAAAGTTTGCCTGGGCGATGGATGTTGAACCTTCCTTCACATTCTAAATTTTT GGTGGTTGTTATAGTGTAGGACATCTCTTCAAAGTCAAGTCTCCCTCCTAATACCCAATT GTTCACATTTCCCCCTTCCTCCCTCCTGGAAAGAGAATAGGAAAAAAGTTCTATTATTTT TGCACTTAAAAAAGAAGAAAAAAAAAGAGATCTTTGATCGTTGTCTGACAATATTTAAAC TTGTTTACCCTGACAAATTCCTGTTGTAATTTGAGCTTCTGAATTTATGGGGTAAGTTTT CCTTAATCGCCTCTCTTTCAAATTTAATTTCCGTTTGTGAATACTCTTAGATGTTCTAAC TTGTTTAAAAATGATCAAGTGCCATGTTCTTCAGGAAGGAATTTCAAGTTTTCTGGGTAA TGTGTAAGCTAGCATCAACGATAATTTATGATAATTTTTTTTTTTGGCACCAAGTGTACG AGCTGAAGGGTATTGCCATTCATATTTTGCTGAAATTGTGCAATCCCACGGATTCTTCAC TTGAGTAATTGTAGTTGGGTTGATTCTTGGAGATTTCGAATTTGGATCTTAAGAGTTATA ACAGTTTCCTTTTATCTGCAAATGTTTGCTCCTATGGATTAATTTTTGCTATCAAGTTAG GTATAAAGTAAAGCAGGGTGATAGTAGGCAGTACAAAGGAGGAGTTGGGGATATTGCCAT TCATATTTTGAGTATCAAGAATTGGCAATAAACTCACATGTATATAGGAGCACAATGTCA ATAGTAAGAAAAAACTTAGAAATTGAAGCAAAAGAAGAAAACGTTATTGCTATACAACTA CGTTTTCTTGATTTTATAGAGAAAATGGTCAAAACGGTGCCTAGCTTTGGTTCCTTTTGG TGCTTAATGCGAAGGCTTAACGATCCTTAACGTATTTGAACAAGTGATTAAGACTTCTAT TTCCCTGAAAAGTAGATTGATATAGATCAAATTTTGATTTAATATTTTCAATACAAAAAT CACTTTATAATTTCCAAAGTAACTTGAAAAAGTCGTGGACAAACTTTTCTTGTTTGAAAT TGTTTTACGTAGTTTGATCTTTGATCATAATTTTTTTTTTATTTGAAAAGTAATTATCTC ATGCTCTATTTATTTGACCGTAAAAGGATTGGGTGTTAGTTATTGGGTTTAAGACCATAC TGATCACAACTTAAAAT