Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc06g062530.3.1
PEP
Solyc06g062530.3.1
Position on the Genome Chromosome SL3.0ch06
Start Position 39560507
End Position 39572477
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI03700969
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WD40 repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR000009,IPR036322,IPR001680,IPR018067
InterPro Description Details
GO ID
GO:0070262,GO:0005829,GO:0019888,GO:0000159
GO Description Details
GOslim ID
GO:0006793,GO:0006464,GO:0016787,GO:0030234,GO:0005515,GO:0005737,GO:0050789,GO:0008287
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.