Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc06g008970.3.1 |
| PEP | Solyc06g008970.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch06 | |
| Start Position | 2909195 | ||
| End Position | 2918151 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KPRO00012546 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | ATP-dependent helicase, C-terminal |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | refseq |
|
| Protein name | general transcription and DNA repair factor IIH helicase subunit XPD |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF06777,PF13307,PF06733 |
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| Pfam Description | Details | ||
| InterPro ID | IPR010614,IPR010643,IPR006555 |
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| InterPro Description | Details | ||
| GO ID | GO:0016818,GO:0003676,GO:0008026,GO:0004003,GO:0003677,GO:0005524,GO:0006139 |
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| GO Description | Details | ||
| GOslim ID | GO:0006139,GO:0043167,GO:0000166,GO:0003676,GO:0016787 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum pennellii | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
