Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc05g054520.3.1 |
| PEP | Solyc05g054520.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch05 | |
| Start Position | 65273378 | ||
| End Position | 65279325 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01131574 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | PFTB repeat |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | Geranylgeranyl transferase type I subunit beta |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF00432 |
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| Pfam Description | Details | ||
| InterPro ID | IPR041960,IPR001330,IPR008930 |
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| InterPro Description | Details | ||
| GO ID | GO:0018342,GO:0004662,GO:0005953,GO:0018344 |
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| GO Description | Details | ||
| GOslim ID | GO:0006464,GO:0016740,GO:0032991 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
