Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g054520.3.1
CDS Infomation	Geranylgeranyl transferase type-1 subunit beta (AHRD V3.3 *** W9SPR0_9ROSA)
Sequence	ATGGCGGAGGAAGATAGTGATTTTCTGAGCTTATCCGATCTAGAATCTGAGCTAGATTCA ATCTCTATCCCTATGTTCTTCGACAAAAATCGCCATATTTGTTATTTAGAGATGATGCTT GAGCTACTACCTTCACCTTACCAATCGCAGGAGATCAATCGTCTCACTCTTGCTTACTTC GTCGTCTGCGGTCTCGATATCCTTCGCTCTCTCGATCGCGTTGACAAAGAAGGGGTGATT AATTGGGTTTTGTCACTGCAAACTCATCTGCAAGACGAAGCTGAACTGAGCAATGGACAA TTTTATGGGTTCCATGGTTCTAGAAGTTCTCAGTTTCAACCAAATGACTATGGGAATGCG ATCCCAAATTGCAGTCATTTGGCAAGTACTTACTGCGCACTGTCCATATTGAAGACTCTT GGTTATGATTTAACACTAATGGATTCCATGTCAATCATCAAATCAATGAAAAATCTTCAG CAACATGATGGGAGCTTTATGCCCATTCATAGCGGGGCAGAGACAGACCTCCGCTTTGTA TATTGTGCAGCGGCAATCTCTTCAATGTTGGAAAACTGGAGTGGCATTGACAAAGAGAAA GCCAAGGAGTACATAATAAACTGTCAGTCATACGATGGTGGCTTTGGTTTAACTCCTAGT TCAGAATCACATGGTGGTGCCACTTTTTGTGCTGTTGCATCTCTCAGATTGATGGGATTA ATTGAAGATGATATATTATCGAAGAATGTATCCTCTTGTTTCATAGACGTGCCCTTGCTT CTAGACTGGTGCCTACAGAGACAGGCAGCCACTGATGGTGGATTCCAAGGTAGACTAAAC AAAGCTACTGACACCTGTTATGCTTTCTGGGTGGGAGGAGTTTTAAAGATCTTGGGGGCT CACAAGTTCATCGACTATGAAGGCTTACGTAAATTTCTTTTCACCTGTCAATCCCAGTAT GGTGGTTTTGGTAAGACTCCGGAGCAGCTGCCAGATCTTTACCATGCCTACTATGGATTT TGTGCATTTAGTATGTTAGAGGAACCTGGCCTCAAATCGATCTGCACTGAGCTGGGTATA ACAAATGGACCTGTGCAGCTGCTATAA

Peptide Sequence

PEP ID	Solyc05g054520.3.1
PEP Infomation	Geranylgeranyl transferase type-1 subunit beta (AHRD V3.3 *** W9SPR0_9ROSA)
Sequence	MAEEDSDFLSLSDLESELDSISIPMFFDKNRHICYLEMMLELLPSPYQSQEINRLTLAYF VVCGLDILRSLDRVDKEGVINWVLSLQTHLQDEAELSNGQFYGFHGSRSSQFQPNDYGNA IPNCSHLASTYCALSILKTLGYDLTLMDSMSIIKSMKNLQQHDGSFMPIHSGAETDLRFV YCAAAISSMLENWSGIDKEKAKEYIINCQSYDGGFGLTPSSESHGGATFCAVASLRLMGL IEDDILSKNVSSCFIDVPLLLDWCLQRQAATDGGFQGRLNKATDTCYAFWVGGVLKILGA HKFIDYEGLRKFLFTCQSQYGGFGKTPEQLPDLYHAYYGFCAFSMLEEPGLKSICTELGI TNGPVQLL*

Transcript Sequence

Transcript ID	Solyc05g054520.3.1
Transcript Infomation	Geranylgeranyl transferase type-1 subunit beta (AHRD V3.3 *** W9SPR0_9ROSA)
Sequence	GCGTGCATATGCCTTATTACAACAAAATTAGTGAAAACTTCGAATCGCCGGATTTTCTCG CCGCCGGCCGTTTTCCGACTAGTCCCTACCATGGCGGAGGAAGATAGTGATTTTCTGAGC TTATCCGATCTAGAATCTGAGCTAGATTCAATCTCTATCCCTATGTTCTTCGACAAAAAT CGCCATATTTGTTATTTAGAGATGATGCTTGAGCTACTACCTTCACCTTACCAATCGCAG GAGATCAATCGTCTCACTCTTGCTTACTTCGTCGTCTGCGGTCTCGATATCCTTCGCTCT CTCGATCGCGTTGACAAAGAAGGGGTGATTAATTGGGTTTTGTCACTGCAAACTCATCTG CAAGACGAAGCTGAACTGAGCAATGGACAATTTTATGGGTTCCATGGTTCTAGAAGTTCT CAGTTTCAACCAAATGACTATGGGAATGCGATCCCAAATTGCAGTCATTTGGCAAGTACT TACTGCGCACTGTCCATATTGAAGACTCTTGGTTATGATTTAACACTAATGGATTCCATG TCAATCATCAAATCAATGAAAAATCTTCAGCAACATGATGGGAGCTTTATGCCCATTCAT AGCGGGGCAGAGACAGACCTCCGCTTTGTATATTGTGCAGCGGCAATCTCTTCAATGTTG GAAAACTGGAGTGGCATTGACAAAGAGAAAGCCAAGGAGTACATAATAAACTGTCAGTCA TACGATGGTGGCTTTGGTTTAACTCCTAGTTCAGAATCACATGGTGGTGCCACTTTTTGT GCTGTTGCATCTCTCAGATTGATGGGATTAATTGAAGATGATATATTATCGAAGAATGTA TCCTCTTGTTTCATAGACGTGCCCTTGCTTCTAGACTGGTGCCTACAGAGACAGGCAGCC ACTGATGGTGGATTCCAAGGTAGACTAAACAAAGCTACTGACACCTGTTATGCTTTCTGG GTGGGAGGAGTTTTAAAGATCTTGGGGGCTCACAAGTTCATCGACTATGAAGGCTTACGT AAATTTCTTTTCACCTGTCAATCCCAGTATGGTGGTTTTGGTAAGACTCCGGAGCAGCTG CCAGATCTTTACCATGCCTACTATGGATTTTGTGCATTTAGTATGTTAGAGGAACCTGGC CTCAAATCGATCTGCACTGAGCTGGGTATAACAAATGGACCTGTGCAGCTGCTATAAATC ATGCTCCACGCTCATGATCACAACGATTTGCAAGGCTCAGGTACAATTAAGTTGCTTGGA GATAGAATTGATACTTTTTATCTATTTCTTTTCGTCTTTTCCGTGTATTATTAAATTATA GCATATTTGATTCAAGATTTTTTTTGGCATTGATGATACAGCTTTATTTTCACCTTGTTT TGTTCATTTGAAAGTGATCGCTTAATTGTTGTAGCATTTTTGACATTTTGCTCCGAGATA GTGGCTTTGTCACAAGTAGTCGCCTATCTAATTATCGGTTTTTCT