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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc05g006630.3.1
PEP
Solyc05g006630.3.1
Position on the Genome Chromosome SL3.0ch05
Start Position 1281121
End Position 1291292
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00896478
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Toll/interleukin-1 receptor homology (TIR) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01582,PF00931
Pfam Description Details
InterPro ID
IPR002182,IPR003591,IPR027417,IPR001611,IPR035897,IPR003593,IPR000157,IPR032675
InterPro Description Details
GO ID
GO:0061809,GO:0007165,GO:0050135,GO:0043531,GO:0006952
GO Description Details
GOslim ID
GO:0009975,GO:0050896,GO:0050789,GO:0016787,GO:0000166,GO:0043167,GO:0007154
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.