Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc05g006630.3.1
CDS Infomation	disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT1G27180.8)
Sequence	ATGACCTCAGGGCACAGATTCCGATGGGATATATTTCTGAGTTTCAGAGGAGAAGACACT CGTCATGGTTTCACTGGGAAACTCTACAATGAACTCGTACGGAACGGCGTACGGACGTTC ATCGACAACGAAGATCTGGATCGCGGTGAAGAGATCTCGAAGAAGCTAGTAGCTGCGATT GAGGATTCAGCGGCTTCGATCGCTGTGATTTCGGAGAACTATGCTGAATCGAAATGGTGC CTCGAAGAACTAGCGAAGATCTGGGACTGTAAGAAGCTATTGTTGCCGGTTTTCTATGAA GTTGACCCGTCGAATGTGCGGAAACAGAAAGGTACGTTTGCGAAGCATTTTGACGAGCAT GAGATTTTGCTGGAGGCGGCGCCGGAGAAGGTTTCACGGTGGAGAGATGCTTTGACGAAA GCTGCTAATACCTCCGGTTGGGATTCTAGGTTCTGGGAAGAAGCAGATTTAATCCAATCT CTAGTCAAGAAAGTTCTGGGGAAACTTGATAATACACCTATAGGTGTGGCTAAATACCCC GTAGGACTTCATTCTCGTCTTGATCAATTGCTCACGCTACTCGACGTTAAAGCAAATGGT GTGAAAGTTGTAGGATTGTACGGAATGGGAGGAGTGGGCAAGACCACTCTTGCCAAGGCT TTGTACAATCAGCTTGTTGTTGATTTCAAGAAACGTAGCTTTATTTCAGATGTTAAAGGA ACTGCAAGGCAACAAAATGGTTTAGTCACTCTTCAAAGCAAACTCATTTGTGATCTTAAC TCAGGCGCTTCGCCTATCATAGACAGTACTGCTAAAGGTATCCGATTAATAAATGAATCT GCGAATAATGAGCGAGTTGCTATTTTCCTAGATGATGTGGATGATGCAAACCAACTTCGT GAATTGATTGGTGGTAGAGACCAGTTTTGCCAAGGAAGCAGAATCATTGTCACCACTAGA GATCAAAACGTCTTAGATCCAAGTATTGTAAACGACACTTTTGAGGTAAAAGTGCTCTAC TTGTCTGATTCACTTAAGTTACTAAGTTATCATGCATTTGGAAAAGAGCAGCCTCCGAAG AAGTTTTTGGATCTTGCTAATGAATTTGTAACACTTAGTGGGGGATTACCTCTGGCTTTG GAAATTTTTGGATCTTCATTGTTCTATAAGAAAGGATTGAAGGAGTGGGAAGATGTAGTG CAAAAGTTTAGACAGATCCGTCCAGGTGAACTTCAAGATATCTTAGAAATAAGTTTTGGT GCTCTAGATGAACAAGAAAGGTGCATCTTTCTTGACTTAGCATGTCTTCTTCTTAATACA AGGCTTGAAAGGGAAGATGCAATTGCAATATTTAAGGGTTGTGGTTTTGCCGCTGAAACT GCAATAACAGCACTCACAGCAAAATCGCTTCTTAAAATAGTTGATGGAAATGTTTTGTGG ATGCATGATCAGCTCAAAGACATGGGAAGACAAATCGTACAACGTGAGAATTCTGGAGAT GTTGATAAGCGTAGTAGATTGTGGAATCACGATGATATTATGACTGTCCTAAATAACTAC AAGGGCACAAGTAACATTGAGGGTATTGTGTTTCACTTTGAGAGGAATCAAGATCAGAAT CCTAAGGAAGTATCCTGGATCTGTTTGATTTTGAAGAAAGTACTTGAAAAGTATATTGGC CTAGGTAGGACGGCAAATGGTTCAACATTTCACACTAGAGCTTTTCAGTGCATGGTCAAA CTGAGACTCCTCCAAATCAATCATGTTAAATTGGTTGGAGATTTCAAGCTATTACCTGCT GACCTAAAGTGGCTGCAGTGGAAAGGTTGCCCTTTGGAAGTTATTCCTCCAGAGTTGTTG TCCCGAAAGATTGCAGTTCTTGATATATCGGAGAGCATGATCACACAGGTCTGGATCAAG AAAAAGTGGAATTTATACCAGAACAAGATGGCAGAGCAGCTGAAGGTTATGAATCTACGT AGGTGTCGCCAACTTAAGGACATCCCTGATTTATCTGGACTTCAATTGGAGAAGCTGATT CTTGAGGAATGCAATGAACTGGTTAAGATCCATCCATCAATTGGAGACTTGACTATGTTG ACCCTTCTAAACATGAAGGGTTGTAAGAATCTTTTGGCATTTCCAGATGATGTGTCTGGA TTGAAACGTCTTGAAGTACTTATCCTATCTGATTGCTCAAGTCTAACAAAATTACCAGAG GACTTAGGTGGCTGGAAATCCTTGAGAGAGCTTCTTCTTGATGGTACCGCAATAACAGAG CTACCTAACTCTATCTTCCGCCTGAAGAATCTTCAGATGTTGAATTTAAATGATTGCTGG TCTTTGAAGTTGTTGCCTACAGCTATCGGGAATCTAAGTTCGCTGAGCTCTCTATCTCTT AGTGGATCAGCTTTAAAGGAATTGCCTGATTCAATTGGAAATTTGAAAGATCTTGAGGAA TTAAGTTTGAGAATGTGCAAGGGACTCATCTCACTTCCTGATTCCCTCGGAAATCTTAGA TCATTAATACGACTTTATCTTGACAACAGCTCCATAAAAGAATTGCCACCTTCTGTTGGT TCATTATCTCAATTGAAGTTCCTTTCACTCAGCAATTGCAAGTCCTTTAGTGAGTTGCCC AATTTCAAGAATAGCTTCTCGTCATTGATTAGGCTTTGTCTACAAGGGACCTCAGTTAGT GAACAAAGTTTCCAGTTAGGAAGCTTCGAGTCCCTTGAGATTCTTGAGCTGGGGTACTGC ACTTCAATCAGATCTTTATCTAGCTCAATTGGAAAGATGTCATGTTTAACTACTTTGGAC CTACATAATACATCAATTTCTGAGTTGCCAGACGAGATATGTTTATTGGAAAAACTTTGG GAGCTGAACCTGAACAACTGTTTGAATCTTCAACATCTTCCGGCTTCAATTGGAAGCCTT AAGAGGTTGTGTTACCTCTATATGACGGAAACTGCTGTCTCAGAATTACCTGATCAAATT GGAATGCTTTCAAGCTTAAAGCTACTGAAGATGAGAAAGACACCACAGCTTAGAGATGAT AAACTGCTGCTGGATATGGAAAATGGAGAAAGTTCTAAACGCGTTACTCTTCCAGAATCA TTTTCGAATCTCTCATCCTTGGAATTCCTAGATGCTCATGCTTGGAAAATATCTGGGAAT ATTTCTGATGATTTTGAGAAGTTGGCTGCTTTGGAAGAACTTGACCTCGGGTACAATGAT TTTTGCAGCCTCCCTTCTAGCATGAAAAAACTGCGTGTTCTCAAGCGTTTGATTCTCTCA AACTGCAGAAAGCTCAAATTTCTCCCTGACCTTCCCTCAAGTTTGGTATGTTTACATGCT GCAAACTGCTCCGCGTTGGAACAGATAGCTAGCGTAGCAAATTTGAAGTACTTGGAAGAT CTCCAAATCAGTAATTGCAAGAAGATAACAGATATTCCTGGCCTTGAAAGCTTGAAATCT TTGAAAAGGTTGTATACAGTTGGTTGCAACGCGTGCTTGCCTTCTATAAAAAGGACTATT TCTAAGGATTCTCTAAGGCATATGCAGTATCTCTGTGTTCCAGGGGATGACCTTCCAGAT TGGTTTATTCATGAAGTACCTAACTTCTCAACTCGTAAGCATCGTGATCTCAAGGGAGTG ATCATTGGCATAGTTCTCTCTCTAGACCAACAAGTAGAGGACAATTTCAGACACAAAGTC CCAGCAATCGTGGATATACAAGCAACGATTACCACACCAGGTGATGCTAAACCTAAACAT ACAAAGACTTTGTACTTGTTGGGGGTTCCTGATACGGATGAAGATCAGCTATACTTGTGT CGATTTCAAGAACACAGTTTTACGTTTATGTTGAAAGAAGGTGACAGACTGCAGGTTGTA GTTAGGGAGAATCCGCGTTTTAATGGCCTCAAACTGAAGAAGCATGGAATGCACTTGGTT TTCGAAAATGATGATGACTTTGATAACAATGATGAGGATTTGTTTGATGAATCTCAGCAA TCTGTGTCTAAGAAACTTGCTAACTTCTTTCATTCCCAGAAATGA

Peptide Sequence

PEP ID	Solyc05g006630.3.1
PEP Infomation	disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT1G27180.8)
Sequence	MTSGHRFRWDIFLSFRGEDTRHGFTGKLYNELVRNGVRTFIDNEDLDRGEEISKKLVAAI EDSAASIAVISENYAESKWCLEELAKIWDCKKLLLPVFYEVDPSNVRKQKGTFAKHFDEH EILLEAAPEKVSRWRDALTKAANTSGWDSRFWEEADLIQSLVKKVLGKLDNTPIGVAKYP VGLHSRLDQLLTLLDVKANGVKVVGLYGMGGVGKTTLAKALYNQLVVDFKKRSFISDVKG TARQQNGLVTLQSKLICDLNSGASPIIDSTAKGIRLINESANNERVAIFLDDVDDANQLR ELIGGRDQFCQGSRIIVTTRDQNVLDPSIVNDTFEVKVLYLSDSLKLLSYHAFGKEQPPK KFLDLANEFVTLSGGLPLALEIFGSSLFYKKGLKEWEDVVQKFRQIRPGELQDILEISFG ALDEQERCIFLDLACLLLNTRLEREDAIAIFKGCGFAAETAITALTAKSLLKIVDGNVLW MHDQLKDMGRQIVQRENSGDVDKRSRLWNHDDIMTVLNNYKGTSNIEGIVFHFERNQDQN PKEVSWICLILKKVLEKYIGLGRTANGSTFHTRAFQCMVKLRLLQINHVKLVGDFKLLPA DLKWLQWKGCPLEVIPPELLSRKIAVLDISESMITQVWIKKKWNLYQNKMAEQLKVMNLR RCRQLKDIPDLSGLQLEKLILEECNELVKIHPSIGDLTMLTLLNMKGCKNLLAFPDDVSG LKRLEVLILSDCSSLTKLPEDLGGWKSLRELLLDGTAITELPNSIFRLKNLQMLNLNDCW SLKLLPTAIGNLSSLSSLSLSGSALKELPDSIGNLKDLEELSLRMCKGLISLPDSLGNLR SLIRLYLDNSSIKELPPSVGSLSQLKFLSLSNCKSFSELPNFKNSFSSLIRLCLQGTSVS EQSFQLGSFESLEILELGYCTSIRSLSSSIGKMSCLTTLDLHNTSISELPDEICLLEKLW ELNLNNCLNLQHLPASIGSLKRLCYLYMTETAVSELPDQIGMLSSLKLLKMRKTPQLRDD KLLLDMENGESSKRVTLPESFSNLSSLEFLDAHAWKISGNISDDFEKLAALEELDLGYND FCSLPSSMKKLRVLKRLILSNCRKLKFLPDLPSSLVCLHAANCSALEQIASVANLKYLED LQISNCKKITDIPGLESLKSLKRLYTVGCNACLPSIKRTISKDSLRHMQYLCVPGDDLPD WFIHEVPNFSTRKHRDLKGVIIGIVLSLDQQVEDNFRHKVPAIVDIQATITTPGDAKPKH TKTLYLLGVPDTDEDQLYLCRFQEHSFTFMLKEGDRLQVVVRENPRFNGLKLKKHGMHLV FENDDDFDNNDEDLFDESQQSVSKKLANFFHSQK*

Transcript Sequence

Transcript ID	Solyc05g006630.3.1
Transcript Infomation	disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT1G27180.8)
Sequence	TTTTTTGTTTGAGAAATTCTAGAGATGTCTACGAACAATATTAGGGAAATATTGCACATA GTGTTAGGATTTTTCGTTTTTATATGCACTAGTTAATTATACCTATGCATTTAATTTGAT TTTAGCTGACTTCCAATGTAATTTTATACTACATGAAATTTTATGTGATAAATTATGTTT ATATTTTTCGTTTAATATATGTATTATTCGTATATATGTTAGCTGAAGCTAAATTAAAAT ACGCATTATTATGCCAAAAACTTTATGAACCGTTCATGATTTTCCCGCTGACAGGTCTGT AACCGTAAACCGTACGATATATAAACAATACATACAAGTTCCAGTACAGAGCTGAAACGA AAAAAGGGAATTTCCGGCTATGGCGGACGAGGAGGAGGAGGAGGCGTGGTCCATGACCTC AGGGCACAGATTCCGATGGGATATATTTCTGAGTTTCAGAGGAGAAGACACTCGTCATGG TTTCACTGGGAAACTCTACAATGAACTCGTACGGAACGGCGTACGGACGTTCATCGACAA CGAAGATCTGGATCGCGGTGAAGAGATCTCGAAGAAGCTAGTAGCTGCGATTGAGGATTC AGCGGCTTCGATCGCTGTGATTTCGGAGAACTATGCTGAATCGAAATGGTGCCTCGAAGA ACTAGCGAAGATCTGGGACTGTAAGAAGCTATTGTTGCCGGTTTTCTATGAAGTTGACCC GTCGAATGTGCGGAAACAGAAAGGTACGTTTGCGAAGCATTTTGACGAGCATGAGATTTT GCTGGAGGCGGCGCCGGAGAAGGTTTCACGGTGGAGAGATGCTTTGACGAAAGCTGCTAA TACCTCCGGTTGGGATTCTAGGTTCTGGGAAGAAGCAGATTTAATCCAATCTCTAGTCAA GAAAGTTCTGGGGAAACTTGATAATACACCTATAGGTGTGGCTAAATACCCCGTAGGACT TCATTCTCGTCTTGATCAATTGCTCACGCTACTCGACGTTAAAGCAAATGGTGTGAAAGT TGTAGGATTGTACGGAATGGGAGGAGTGGGCAAGACCACTCTTGCCAAGGCTTTGTACAA TCAGCTTGTTGTTGATTTCAAGAAACGTAGCTTTATTTCAGATGTTAAAGGAACTGCAAG GCAACAAAATGGTTTAGTCACTCTTCAAAGCAAACTCATTTGTGATCTTAACTCAGGCGC TTCGCCTATCATAGACAGTACTGCTAAAGGTATCCGATTAATAAATGAATCTGCGAATAA TGAGCGAGTTGCTATTTTCCTAGATGATGTGGATGATGCAAACCAACTTCGTGAATTGAT TGGTGGTAGAGACCAGTTTTGCCAAGGAAGCAGAATCATTGTCACCACTAGAGATCAAAA CGTCTTAGATCCAAGTATTGTAAACGACACTTTTGAGGTAAAAGTGCTCTACTTGTCTGA TTCACTTAAGTTACTAAGTTATCATGCATTTGGAAAAGAGCAGCCTCCGAAGAAGTTTTT GGATCTTGCTAATGAATTTGTAACACTTAGTGGGGGATTACCTCTGGCTTTGGAAATTTT TGGATCTTCATTGTTCTATAAGAAAGGATTGAAGGAGTGGGAAGATGTAGTGCAAAAGTT TAGACAGATCCGTCCAGGTGAACTTCAAGATATCTTAGAAATAAGTTTTGGTGCTCTAGA TGAACAAGAAAGGTGCATCTTTCTTGACTTAGCATGTCTTCTTCTTAATACAAGGCTTGA AAGGGAAGATGCAATTGCAATATTTAAGGGTTGTGGTTTTGCCGCTGAAACTGCAATAAC AGCACTCACAGCAAAATCGCTTCTTAAAATAGTTGATGGAAATGTTTTGTGGATGCATGA TCAGCTCAAAGACATGGGAAGACAAATCGTACAACGTGAGAATTCTGGAGATGTTGATAA GCGTAGTAGATTGTGGAATCACGATGATATTATGACTGTCCTAAATAACTACAAGGGCAC AAGTAACATTGAGGGTATTGTGTTTCACTTTGAGAGGAATCAAGATCAGAATCCTAAGGA AGTATCCTGGATCTGTTTGATTTTGAAGAAAGTACTTGAAAAGTATATTGGCCTAGGTAG GACGGCAAATGGTTCAACATTTCACACTAGAGCTTTTCAGTGCATGGTCAAACTGAGACT CCTCCAAATCAATCATGTTAAATTGGTTGGAGATTTCAAGCTATTACCTGCTGACCTAAA GTGGCTGCAGTGGAAAGGTTGCCCTTTGGAAGTTATTCCTCCAGAGTTGTTGTCCCGAAA GATTGCAGTTCTTGATATATCGGAGAGCATGATCACACAGGTCTGGATCAAGAAAAAGTG GAATTTATACCAGAACAAGATGGCAGAGCAGCTGAAGGTTATGAATCTACGTAGGTGTCG CCAACTTAAGGACATCCCTGATTTATCTGGACTTCAATTGGAGAAGCTGATTCTTGAGGA ATGCAATGAACTGGTTAAGATCCATCCATCAATTGGAGACTTGACTATGTTGACCCTTCT AAACATGAAGGGTTGTAAGAATCTTTTGGCATTTCCAGATGATGTGTCTGGATTGAAACG TCTTGAAGTACTTATCCTATCTGATTGCTCAAGTCTAACAAAATTACCAGAGGACTTAGG TGGCTGGAAATCCTTGAGAGAGCTTCTTCTTGATGGTACCGCAATAACAGAGCTACCTAA CTCTATCTTCCGCCTGAAGAATCTTCAGATGTTGAATTTAAATGATTGCTGGTCTTTGAA GTTGTTGCCTACAGCTATCGGGAATCTAAGTTCGCTGAGCTCTCTATCTCTTAGTGGATC AGCTTTAAAGGAATTGCCTGATTCAATTGGAAATTTGAAAGATCTTGAGGAATTAAGTTT GAGAATGTGCAAGGGACTCATCTCACTTCCTGATTCCCTCGGAAATCTTAGATCATTAAT ACGACTTTATCTTGACAACAGCTCCATAAAAGAATTGCCACCTTCTGTTGGTTCATTATC TCAATTGAAGTTCCTTTCACTCAGCAATTGCAAGTCCTTTAGTGAGTTGCCCAATTTCAA GAATAGCTTCTCGTCATTGATTAGGCTTTGTCTACAAGGGACCTCAGTTAGTGAACAAAG TTTCCAGTTAGGAAGCTTCGAGTCCCTTGAGATTCTTGAGCTGGGGTACTGCACTTCAAT CAGATCTTTATCTAGCTCAATTGGAAAGATGTCATGTTTAACTACTTTGGACCTACATAA TACATCAATTTCTGAGTTGCCAGACGAGATATGTTTATTGGAAAAACTTTGGGAGCTGAA CCTGAACAACTGTTTGAATCTTCAACATCTTCCGGCTTCAATTGGAAGCCTTAAGAGGTT GTGTTACCTCTATATGACGGAAACTGCTGTCTCAGAATTACCTGATCAAATTGGAATGCT TTCAAGCTTAAAGCTACTGAAGATGAGAAAGACACCACAGCTTAGAGATGATAAACTGCT GCTGGATATGGAAAATGGAGAAAGTTCTAAACGCGTTACTCTTCCAGAATCATTTTCGAA TCTCTCATCCTTGGAATTCCTAGATGCTCATGCTTGGAAAATATCTGGGAATATTTCTGA TGATTTTGAGAAGTTGGCTGCTTTGGAAGAACTTGACCTCGGGTACAATGATTTTTGCAG CCTCCCTTCTAGCATGAAAAAACTGCGTGTTCTCAAGCGTTTGATTCTCTCAAACTGCAG AAAGCTCAAATTTCTCCCTGACCTTCCCTCAAGTTTGGTATGTTTACATGCTGCAAACTG CTCCGCGTTGGAACAGATAGCTAGCGTAGCAAATTTGAAGTACTTGGAAGATCTCCAAAT CAGTAATTGCAAGAAGATAACAGATATTCCTGGCCTTGAAAGCTTGAAATCTTTGAAAAG GTTGTATACAGTTGGTTGCAACGCGTGCTTGCCTTCTATAAAAAGGACTATTTCTAAGGA TTCTCTAAGGCATATGCAGTATCTCTGTGTTCCAGGGGATGACCTTCCAGATTGGTTTAT TCATGAAGTACCTAACTTCTCAACTCGTAAGCATCGTGATCTCAAGGGAGTGATCATTGG CATAGTTCTCTCTCTAGACCAACAAGTAGAGGACAATTTCAGACACAAAGTCCCAGCAAT CGTGGATATACAAGCAACGATTACCACACCAGGTGATGCTAAACCTAAACATACAAAGAC TTTGTACTTGTTGGGGGTTCCTGATACGGATGAAGATCAGCTATACTTGTGTCGATTTCA AGAACACAGTTTTACGTTTATGTTGAAAGAAGGTGACAGACTGCAGGTTGTAGTTAGGGA GAATCCGCGTTTTAATGGCCTCAAACTGAAGAAGCATGGAATGCACTTGGTTTTCGAAAA TGATGATGACTTTGATAACAATGATGAGGATTTGTTTGATGAATCTCAGCAATCTGTGTC TAAGAAACTTGCTAACTTCTTTCATTCCCAGAAATGAATTCAGCATACAGGGAGTGGATG TGAATCCAAGAACTTTATAAATGCGGATGGTCTATCAGAAACAATCTCTCTACCTTCTAA AAGTAGAAATAAAAGTATGCACTCTCCCCGACTTCATTTGTGAGATTACACCAAACATAT TGTTGTTGTTGTTGTTATGTGTGTATATAT