Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc05g006540.3.1 |
| PEP | Solyc05g006540.3.1 |
||
| Position on the Genome | Chromosome | SL3.0ch05 | |
| Start Position | 1151308 | ||
| End Position | 1165565 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01883421 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | Paired amphipathic helix |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | HDAC_interact domain-containing protein |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF16879,PF02671,PF08295 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR013194,IPR003822,IPR031693,IPR036600,IPR039774 |
||
| InterPro Description | Details | ||
| GO ID | GO:0003714,GO:0000122,GO:0000785,GO:0000118,GO:0016575 |
||
| GO Description | Details | ||
| GOslim ID | GO:0050789,GO:0006351,GO:0032991,GO:0009059,GO:0065009,GO:0016070,GO:0005694,GO:0051276,GO:0006464,GO:0005634 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
