Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc03g025890.2.1 |
| PEP | Solyc03g025890.2.1 |
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| Position on the Genome | Chromosome | SL3.0ch03 | |
| Start Position | 3317451 | ||
| End Position | 3337465 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00573026 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | DNA mismatch repair protein MutS, core |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | DNA mismatch repair protein |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF00488,PF05188,PF05192,PF01624 |
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| Pfam Description | Details | ||
| InterPro ID | IPR007696,IPR017261,IPR007860,IPR000432,IPR027417,IPR036678,IPR007695,IPR016151,IPR036187 |
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| InterPro Description | Details | ||
| GO ID | GO:0000710,GO:0000735,GO:0043111,GO:0006312,GO:0005524,GO:0006298,GO:0032300,GO:0043570,GO:0008094,GO:0032135,GO:0051096,GO:0032302,GO:0007131 |
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| GO Description | Details | ||
| GOslim ID | GO:0051276,GO:0016787,GO:0000003,GO:0006259,GO:0005634,GO:0006281,GO:0000166,GO:0007049,GO:0065009,GO:0050789,GO:0043167,GO:0000280,GO:0003676,GO:0032300,GO:0006260,GO:0004386 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
