Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc01g081490.3.1 |
| PEP | Solyc01g081490.3.1 |
||
| Position on the Genome | Chromosome | SL3.0ch01 | |
| Start Position | 80542995 | ||
| End Position | 80548782 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KPRO00052633 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | RNA polymerase sigma-70 region 2 |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | refseq |
|
| Protein name | RNA polymerase sigma factor sigB |
||
| Accession | |||
| CrossRef Refseq from UniProt | NA |
||
| EC | NA |
||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF04542,PF04545,PF04539 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR007630,IPR007627,IPR007624 |
||
| InterPro Description | Details | ||
| GO ID | GO:0006352,GO:0003700,GO:0006355 |
||
| GO Description | Details | ||
| GOslim ID | GO:0003676,GO:0006351,GO:0065009,GO:0050789 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Solanum pennellii | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
