Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc01g079530.3.1 |
| PEP | Solyc01g079530.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch01 | |
| Start Position | 78452143 | ||
| End Position | 78454782 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01938023 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-CH-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | RING-CH-type domain-containing protein |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF12906,PF12428 |
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| Pfam Description | Details | ||
| InterPro ID | IPR033275,IPR011016,IPR022143,IPR013083 |
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| InterPro Description | Details | ||
| GO ID | GO:0016020,GO:0008270,GO:0016021,GO:0016567,GO:0004842 |
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| GO Description | Details | ||
| GOslim ID | GO:0006464,GO:0019787,GO:0016020,GO:0043167 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
