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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc01g079530.3.1
CDS Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT1G02610.1)
Sequence

ATGGGAGAAGTGATAATATATGTTGATGATTATGAATTTTTTTCTTCTTCAACATATTTA
TGTAGAATTTGCCATGACGAAGAATTCGAAAGTTGTAAGAAATTAGAAGCTCCATGTGCA
TGTTCTGGAACTGTTAAGTTTGCACACAGGGATTGTATTCAAAAATGGTGTAATGAAAAA
GGAAACACAATTTGCGAAATTTGTTTACAGAAATTTGAACCAGGATATACGGCTCCACCT
CCTAAGAAGAAGGCCCACTTGGTTGATAATAATAATAATAATACAGCTGCAATTATTAGA
GGAAGCGTAGAAGCAGATATAGAAAACGGAAGGGAAAGAGTAGAGTCGGATTCAGAATCA
GAAGAAAGAGAAATGCTGGTGAGGAGTACTCAGTATTATGAATGCTCACAAGCTGCTGAT
AGAAGCGCGTCTTGCTGTCGAACTATTGCTCTTATCTTCACAATTCTGCTTATGATGAGA
CATTTGTTAGAGGTGATGAATGGAGGAGCAAAAAACTATCCCTTTACACTTCCTACATTG
CTAATTATTAAATCAACTGGAATACTCTTGCCCATGTACATTATACTAATGTTAATCACA
AGAATACAGATTATCATTAGACATCATTATCTGGATTCAGAAGACAGGCTATCTAATTCT
GACTAA

Peptide Sequence

PEP ID

Solyc01g079530.3.1
PEP Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT1G02610.1)
Sequence

MGEVIIYVDDYEFFSSSTYLCRICHDEEFESCKKLEAPCACSGTVKFAHRDCIQKWCNEK
GNTICEICLQKFEPGYTAPPPKKKAHLVDNNNNNTAAIIRGSVEADIENGRERVESDSES
EEREMLVRSTQYYECSQAADRSASCCRTIALIFTILLMMRHLLEVMNGGAKNYPFTLPTL
LIIKSTGILLPMYIILMLITRIQIIIRHHYLDSEDRLSNSD*

Transcript Sequence

Transcript ID

Solyc01g079530.3.1
Transcript Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT1G02610.1)
Sequence

AAAGGAAAGAACAAAAAAAAAAACACTCAAAGAGATTATAATAATTATTTTTTTTACCAA
AAAAAAAAGCAAAATTAAGATGGGAGAAGTGATAATATATGTTGATGATTATGAATTTTT
TTCTTCTTCAACATATTTATGTAGAATTTGCCATGACGAAGAATTCGAAAGTTGTAAGAA
ATTAGAAGCTCCATGTGCATGTTCTGGAACTGTTAAGTTTGCACACAGGGATTGTATTCA
AAAATGGTGTAATGAAAAAGGAAACACAATTTGCGAAATTTGTTTACAGAAATTTGAACC
AGGATATACGGCTCCACCTCCTAAGAAGAAGGCCCACTTGGTTGATAATAATAATAATAA
TACAGCTGCAATTATTAGAGGAAGCGTAGAAGCAGATATAGAAAACGGAAGGGAAAGAGT
AGAGTCGGATTCAGAATCAGAAGAAAGAGAAATGCTGGTGAGGAGTACTCAGTATTATGA
ATGCTCACAAGCTGCTGATAGAAGCGCGTCTTGCTGTCGAACTATTGCTCTTATCTTCAC
AATTCTGCTTATGATGAGACATTTGTTAGAGGTGATGAATGGAGGAGCAAAAAACTATCC
CTTTACACTTCCTACATTGCTAATTATTAAATCAACTGGAATACTCTTGCCCATGTACAT
TATACTAATGTTAATCACAAGAATACAGATTATCATTAGACATCATTATCTGGATTCAGA
AGACAGGCTATCTAATTCTGACTAAGACAACTAATACAAGTGTTCAATTTGCATATTCTT
TTTTTATTAACAGTGTAATTTGTATTTCTAAGCATTGAACTGATGCTTATCTAATTTTTT
TCTTCTTCATACACGTGGAGAGTAATTAAAAGTTTTACAAATCAATTATATGATTATAGT
AATATATACAATTTCATTGCTTCTTTTACCAAACAA