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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G52100.1
PEP
AT5G52100.1
Position on the Genome Chromosome Chr5
Start Position 21170203
End Position 21172107
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00430866
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Dihydrodipicolinate reductase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Dihydrodipicolinate reductase-like protein CRR1, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF01113,PF05173
Pfam Description Details
InterPro ID
IPR022663,IPR000846,IPR023940,IPR036291
InterPro Description Details
GO ID
GO:0019877,GO:0009570,GO:0019684,GO:0009507,GO:0009089,GO:0008839
GO Description Details
GOslim ID
GO:0016491,GO:0006520,GO:0015979,GO:0009536,GO:0006091
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G52100
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Dihydrodipicolinate reductase-like protein CRR1, chloroplastic
OrthoDB(1 item)
123892at33090
Dihydrodipicolinate reductase
Pfam(2 items)
 
Dihydrodipicolinate reductase, N-terminus
 
Dihydrodipicolinate reductase, C-terminus
InterPro(4 items)
 
Dihydrodipicolinate reductase, C-terminal
 
Dihydrodipicolinate reductase, N-terminal
 
NAD(P)-bd_dom_sf
Gene ontology(6 items)
BP
diaminopimelate biosynthetic process
CC
chloroplast stroma
BP
photosynthesis, light reaction
BP
lysine biosynthetic process via diaminopimelate
MF
4-hydroxy-tetrahydrodipicolinate reductase
GO slim(5 items)
MF
oxidoreductase activity
BP
cellular amino acid metabolic process
BP
photosynthesis
BP
generation of precursor metabolites and energy

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.