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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G48300.1
PEP
AT5G48300.1
Position on the Genome Chromosome Chr5
Start Position 19570326
End Position 19572557
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00580136
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glucose-1-phosphate adenylyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00483
Pfam Description Details
InterPro ID
IPR029044,IPR005836,IPR011831,IPR011004,IPR005835
InterPro Description Details
GO ID
GO:0030931,GO:0009570,GO:0019252,GO:0005978,GO:0048573,GO:0009536,GO:0008878,GO:0009507,GO:0048046,GO:0005524
GO Description Details
GOslim ID
GO:0050896,GO:0005576,GO:0032501,GO:0043167,GO:0000166,GO:0005976,GO:0000003,GO:0030929,GO:0009536,GO:0009059,GO:0016740,GO:0006112,GO:0032502
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G48300
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic
OrthoDB(1 item)
107536at33090
Glucose-1-phosphate adenylyltransferase
Pfam(1 item)
 
Nucleotidyl transferase
InterPro(5 items)
 
Nucleotide-diphossugar_trans
 
ADP_Glu_pyroP_CS
 
ADP-Glc_PPase
 
Trimer_LpxA-like_sf
 
Nucleotidyl transferase domain
Gene ontology(10 items)
CC
heterotetrameric ADPG pyrophosphorylase complex
CC
chloroplast stroma
BP
starch biosynthetic process
BP
glycogen biosynthetic process
BP
photoperiodism, flowering
MF
glucose-1-phosphate adenylyltransferase activity
GO slim(13 items)
BP
response to stimulus
CC
extracellular region
BP
multicellular organismal process
MF
nucleotide binding
BP
polysaccharide metabolic process
CC
ADPG pyrophosphorylase complex
BP
macromolecule biosynthetic process
MF
transferase activity
BP
energy reserve metabolic process
BP
developmental process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.