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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G46070.1
PEP
AT5G46070.1
Position on the Genome Chromosome Chr5
Start Position 18683468
End Position 18688397
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00217127
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Guanylate-binding protein/Atlastin, C-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
GB1/RHD3-type G domain-containing protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02841,PF02263
Pfam Description Details
InterPro ID
IPR030386,IPR015894,IPR027417,IPR036543,IPR003191
InterPro Description Details
GO ID
GO:0005525,GO:0003924
GO Description Details
GOslim ID
GO:0000166,GO:0016787,GO:0001882,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
GB1/RHD3-type G domain-containing protein
OrthoDB(1 item)
11111at33090
Guanylate-binding protein/Atlastin, C-terminal
Pfam(2 items)
 
Guanylate-binding protein, C-terminal domain
 
Guanylate-binding protein, N-terminal domain
InterPro(5 items)
 
G_GB1_RHD3_dom
 
Guanylate-binding protein, N-terminal
 
P-loop_NTPase
 
Guanylate-bd_C_sf
 
Guanylate-binding protein/Atlastin, C-terminal
Gene ontology(2 items)
MF
GTPase activity
GO slim(4 items)
MF
nucleotide binding
MF
hydrolase activity
MF
nucleoside binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.