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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G43850.1
PEP
AT5G43850.1
Position on the Genome Chromosome Chr5
Start Position 17627364
End Position 17629122
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI03367084
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF03079
Pfam Description Details
InterPro ID
IPR004313,IPR011051,IPR027496,IPR014710
InterPro Description Details
GO ID
GO:0005737,GO:0005634,GO:0005506,GO:0019509,GO:0010309
GO Description Details
GOslim ID
GO:0043094,GO:0051213,GO:0005634,GO:0006520,GO:0043167,GO:0006790,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.