Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G40550.1
PEP
AT5G40550.1
Position on the Genome Chromosome Chr5
Start Position 16241285
End Position 16243100
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01961804
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SAGA-associated factor 29
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
SAGA-associated factor 29 homolog B
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF07039
Pfam Description Details
InterPro ID
IPR010750,IPR037802
InterPro Description Details
GO ID
GO:0043966,GO:0000124,GO:0035064,GO:0043967,GO:0005671,GO:0009651
GO Description Details
GOslim ID
GO:0005634,GO:0006464,GO:0050896,GO:0051276,GO:0031248,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G40550
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.