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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G40090.1
PEP
AT5G40090.1
Position on the Genome Chromosome Chr5
Start Position 16042115
End Position 16043494
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI04728227
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Toll/interleukin-1 receptor homology (TIR) domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00931,PF01582
Pfam Description Details
InterPro ID
IPR000157,IPR003593,IPR027417,IPR035897,IPR002182
InterPro Description Details
GO ID
GO:0007165,GO:0061809,GO:0050135,GO:0043531
GO Description Details
GOslim ID
GO:0050789,GO:0016787,GO:0009975,GO:0043167,GO:0007154,GO:0050896,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.