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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G39830.1
PEP
AT5G39830.1
Position on the Genome Chromosome Chr5
Start Position 15942883
End Position 15945676
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00463899
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Peptidase S1C
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protease Do-like 8, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF13180
Pfam Description Details
InterPro ID
IPR001478,IPR036034,IPR009003,IPR043504,IPR001940
InterPro Description Details
GO ID
GO:0004252,GO:0031977,GO:0009536,GO:0006508,GO:0009579,GO:0010206,GO:0009534,GO:0008233,GO:0009543,GO:0009507
GO Description Details
GOslim ID
GO:0006508,GO:0009536,GO:0019538,GO:0008233,GO:0009579,GO:0015979,GO:0006091
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.