Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G27945.1
PEP
AT5G27945.1
Position on the Genome Chromosome Chr5
Start Position 9976007
End Position 9977601
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02174545
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WD40 repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
WD_REPEATS_REGION domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF12894,PF13943,PF00400
Pfam Description Details
InterPro ID
IPR025265,IPR017986,IPR033010,IPR019775,IPR024977,IPR038214,IPR036322,IPR015943,IPR001680
InterPro Description Details
GO ID
GO:1904668,GO:0010997,GO:0097027,GO:0016567
GO Description Details
GOslim ID
GO:0006464,GO:0005488,GO:0019787,GO:0050789,GO:0065009,GO:0030234
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.