Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G24530.1
PEP
AT5G24530.1
Position on the Genome Chromosome Chr5
Start Position 8378964
End Position 8383154
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00251045
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Oxoglutarate/iron-dependent dioxygenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Protein DOWNY MILDEW RESISTANCE 6
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF14226,PF03171
Pfam Description Details
InterPro ID
IPR026992,IPR027443,IPR005123
InterPro Description Details
GO ID
GO:0051213,GO:0010150,GO:0009620,GO:0002229,GO:0034785,GO:0046244,GO:0002239,GO:0071456,GO:0042742,GO:0033759,GO:0009751,GO:0009813,GO:0009617,GO:0046872
GO Description Details
GOslim ID
GO:0043167,GO:0044419,GO:0006725,GO:0004497,GO:0006082,GO:0008152,GO:0042440,GO:0050896,GO:0032502,GO:0032501,GO:0051213
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G24530
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.