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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G24400.1
PEP
AT5G24400.1
Position on the Genome Chromosome Chr5
Start Position 8330532
End Position 8331784
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00249154
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
6-Phosphogluconolactonase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
6-phosphogluconolactonase 3, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01182
Pfam Description Details
InterPro ID
IPR039104,IPR037171,IPR006148,IPR005900
InterPro Description Details
GO ID
GO:0042128,GO:0005777,GO:0005975,GO:0042742,GO:0009507,GO:0009051,GO:0009570,GO:0071461,GO:0005737,GO:0017057,GO:0002229,GO:0009536
GO Description Details
GOslim ID
GO:0006807,GO:0005737,GO:0050896,GO:0009536,GO:0055114,GO:0016787,GO:0006091,GO:0042579,GO:0006082,GO:0005975,GO:0044419,GO:0006793
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G24400
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
6-phosphogluconolactonase 3, chloroplastic
OrthoDB(1 item)
137615at33090
6-Phosphogluconolactonase
Pfam(1 item)
 
Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
InterPro(4 items)
 
NagB/RpiA_transferase-like
 
Glucosamine/galactosamine-6-phosphate isomerase
 
6-phosphogluconolactonase_DevB
Gene ontology(12 items)
BP
nitrate assimilation
BP
carbohydrate metabolic process
BP
defense response to bacterium
BP
pentose-phosphate shunt, oxidative branch
CC
chloroplast stroma
BP
cellular response to redox state
MF
6-phosphogluconolactonase activity
BP
defense response to oomycetes
GO slim(12 items)
BP
nitrogen compound metabolic process
BP
response to stimulus
BP
oxidation-reduction process
MF
hydrolase activity
BP
generation of precursor metabolites and energy
BP
organic acid metabolic process
BP
carbohydrate metabolic process
BP
interspecies interaction between organisms
BP
phosphorus metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.