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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G18320.1
PEP
AT5G18320.1
Position on the Genome Chromosome Chr5
Start Position 6064431
End Position 6066186
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00646335
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RING-type E3 ubiquitin transferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Putative U-box domain-containing protein 46
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF04564
Pfam Description Details
InterPro ID
IPR011989,IPR003613,IPR016024,IPR013083
InterPro Description Details
GO ID
GO:0004842,GO:0042631,GO:0005634,GO:0005737
GO Description Details
GOslim ID
GO:0005737,GO:0005634,GO:0019787,GO:0007154,GO:0050896,GO:0006464
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.