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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G18180.1
PEP
AT5G18180.1
Position on the Genome Chromosome Chr5
Start Position 6008561
End Position 6009605
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00405350
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
H/ACA ribonucleoprotein complex subunit
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
H/ACA ribonucleoprotein complex subunit 1-like protein 2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF04410
Pfam Description Details
InterPro ID
IPR038664,IPR007504,IPR009000
InterPro Description Details
GO ID
GO:0031429,GO:0000454,GO:0034513,GO:0009535
GO Description Details
GOslim ID
GO:0005730,GO:0005732,GO:0042254,GO:0009536,GO:0003676,GO:0006396,GO:0043412,GO:0016020,GO:0009579
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G18180
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.