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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G17710.1
PEP
AT5G17710.1
Position on the Genome Chromosome Chr5
Start Position 5839560
End Position 5841639
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00455987
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
GrpE nucleotide exchange factor
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
GrpE protein homolog
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01025
Pfam Description Details
InterPro ID
IPR013805,IPR000740,IPR009012
InterPro Description Details
GO ID
GO:0005759,GO:0051087,GO:0006457,GO:0000774,GO:0042803
GO Description Details
GOslim ID
GO:0005515,GO:0005739,GO:0030234,GO:0000166,GO:0016787,GO:0006457
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
GrpE protein homolog
OrthoDB(1 item)
206180at33090
GrpE nucleotide exchange factor
Pfam(1 item)
InterPro(3 items)
 
GrpE_coiled_coil
 
GrpE nucleotide exchange factor
Gene ontology(5 items)
CC
mitochondrial matrix
MF
chaperone binding
BP
protein folding
MF
adenyl-nucleotide exchange factor activity
MF
protein homodimerization activity
GO slim(6 items)
MF
protein binding
CC
mitochondrion
MF
enzyme regulator activity
MF
nucleotide binding
MF
hydrolase activity
BP
protein folding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.