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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G12040.1
PEP
AT5G12040.1
Position on the Genome Chromosome Chr5
Start Position 3885162
End Position 3887772
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00669131
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Carbon-nitrogen hydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Omega-amidase, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00795
Pfam Description Details
InterPro ID
IPR036526,IPR003010
InterPro Description Details
GO ID
GO:0009570,GO:0008270,GO:0009507,GO:0050152,GO:0006107,GO:0009536,GO:0006108,GO:0006541,GO:0006528,GO:0005829
GO Description Details
GOslim ID
GO:0006520,GO:0009536,GO:0005737,GO:0043167,GO:0006082,GO:0043603,GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G12040
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Omega-amidase, chloroplastic
OrthoDB(1 item)
158542at33090
Carbon-nitrogen hydrolase
Pfam(1 item)
 
Carbon-nitrogen hydrolase
InterPro(2 items)
 
C-N_Hydrolase_sf
 
Carbon-nitrogen hydrolase
Gene ontology(10 items)
CC
chloroplast stroma
MF
zinc ion binding
MF
omega-amidase activity
BP
oxaloacetate metabolic process
BP
malate metabolic process
BP
glutamine metabolic process
BP
asparagine metabolic process
GO slim(7 items)
BP
cellular amino acid metabolic process
BP
organic acid metabolic process
BP
cellular amide metabolic process
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.