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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT5G10920.1
PEP
AT5G10920.1
Position on the Genome Chromosome Chr5
Start Position 3441805
End Position 3443892
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00319243
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Argininosuccinate lyase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Argininosuccinate lyase, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF14698,PF00206
Pfam Description Details
InterPro ID
IPR029419,IPR020557,IPR009049,IPR022761,IPR024083,IPR008948,IPR000362
InterPro Description Details
GO ID
GO:0004056,GO:0042450,GO:0005737,GO:0009570,GO:0009507
GO Description Details
GOslim ID
GO:0006520,GO:0009536,GO:0016829,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT5G10920
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Argininosuccinate lyase, chloroplastic
OrthoDB(1 item)
55137at33090
Argininosuccinate lyase
Pfam(2 items)
 
ASL_C2
InterPro(7 items)
 
Arg_succ_lyase_C
 
Fumarate_lyase_CS
 
Argininosuccinate_lyase
 
Fumarate lyase, N-terminal
 
Fumarase/histidase_N
 
L-Aspartase-like
 
Fumarate_lyase_fam
Gene ontology(5 items)
MF
argininosuccinate lyase activity
BP
arginine biosynthetic process via ornithine
CC
chloroplast stroma
GO slim(4 items)
BP
cellular amino acid metabolic process
MF
lyase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.