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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G39970.1
PEP
AT4G39970.1
Position on the Genome Chromosome Chr4
Start Position 18536678
End Position 18538429
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01204373
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Haloacid dehalogenase-like hydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF13419
Pfam Description Details
InterPro ID
IPR006439,IPR023214,IPR041492,IPR023198,IPR036412
InterPro Description Details
GO ID
GO:0016787,GO:0046872,GO:0009507,GO:0009941,GO:0009570,GO:0005886
GO Description Details
GOslim ID
GO:0016787,GO:0016020,GO:0009536,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970
OrthoDB(1 item)
148235at33090
Haloacid dehalogenase-like hydrolase
Pfam(1 item)
 
Haloacid dehalogenase-like hydrolase
InterPro(5 items)
 
HAD-SF_hydro_IA
 
PGP-like_dom2
Gene ontology(6 items)
MF
hydrolase activity
MF
metal ion binding
CC
chloroplast envelope
CC
chloroplast stroma
CC
plasma membrane
GO slim(4 items)
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.