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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G35630.1
PEP
AT4G35630.1
Position on the Genome Chromosome Chr4
Start Position 16904205
End Position 16905497
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00402809
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pyridoxal phosphate-dependent transferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Phosphoserine aminotransferase 1, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00266
Pfam Description Details
InterPro ID
IPR015421,IPR020578,IPR015424,IPR015422,IPR000192,IPR022278
InterPro Description Details
GO ID
GO:0009570,GO:0005737,GO:0009536,GO:0030170,GO:0042803,GO:0006564,GO:0009507,GO:0004648
GO Description Details
GOslim ID
GO:0016740,GO:0043167,GO:0005515,GO:0006520,GO:0019842,GO:0005737,GO:0009536
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G35630
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Phosphoserine aminotransferase 1, chloroplastic
OrthoDB(1 item)
101876at33090
Pyridoxal phosphate-dependent transferase
Pfam(1 item)
 
Aminotransferase class-V
InterPro(6 items)
 
PyrdxlP-dep_Trfase_major
 
Aminotrans_V_PyrdxlP_BS
 
PyrdxlP-dep_Trfase
 
PyrdxlP-dep_Trfase_dom1
 
Aminotransferase class V domain
 
Pser_aminoTfrase
Gene ontology(8 items)
CC
chloroplast stroma
MF
pyridoxal phosphate binding
MF
protein homodimerization activity
BP
L-serine biosynthetic process
MF
O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO slim(7 items)
MF
transferase activity
MF
protein binding
BP
cellular amino acid metabolic process
MF
vitamin binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.