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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G28706.1
PEP
AT4G28706.1
Position on the Genome Chromosome Chr4
Start Position 14167805
End Position 14170619
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00035304
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Carbohydrate kinase PfkB
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00294
Pfam Description Details
InterPro ID
IPR002139,IPR029056,IPR002173,IPR011611
InterPro Description Details
GO ID
GO:0016301,GO:0016773,GO:0019252
GO Description Details
GOslim ID
GO:0009059,GO:0016740,GO:0005976,GO:0006793
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
132789at33090
Carbohydrate kinase PfkB
Pfam(1 item)
 
pfkB family carbohydrate kinase
InterPro(4 items)
 
Ribo/fructo_kinase
 
Ribokinase-like
 
Carboh/pur_kinase_PfkB_CS
 
Carbohydrate kinase PfkB
Gene ontology(3 items)
MF
kinase activity
MF
phosphotransferase activity, alcohol group as acceptor
BP
starch biosynthetic process
GO slim(4 items)
BP
macromolecule biosynthetic process
MF
transferase activity
BP
polysaccharide metabolic process
BP
phosphorus metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.