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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G24830.1
PEP
AT4G24830.1
Position on the Genome Chromosome Chr4
Start Position 12793085
End Position 12795857
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00467353
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Argininosuccinate synthase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Argininosuccinate synthase, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00764
Pfam Description Details
InterPro ID
IPR018223,IPR001518,IPR024074,IPR014729,IPR023434
InterPro Description Details
GO ID
GO:0000053,GO:0005737,GO:0004055,GO:0009507,GO:0000050,GO:0009570,GO:0005524,GO:0009536,GO:0006526
GO Description Details
GOslim ID
GO:0006520,GO:0043603,GO:0016874,GO:0000166,GO:0009536,GO:0005737,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G24830
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Argininosuccinate synthase, chloroplastic
OrthoDB(1 item)
77725at33090
Argininosuccinate synthase
Pfam(1 item)
 
Arginosuccinate synthase
InterPro(5 items)
 
Arginosuc_synth_CS
 
Argininosuccinate synthase
 
AS_cat/multimer_dom_body
 
Rossmann-like_a/b/a_fold
 
Arginosuc_synth_type_1_subfam
Gene ontology(9 items)
BP
argininosuccinate metabolic process
MF
argininosuccinate synthase activity
CC
chloroplast stroma
BP
arginine biosynthetic process
GO slim(7 items)
BP
cellular amino acid metabolic process
BP
cellular amide metabolic process
MF
ligase activity
MF
nucleotide binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.