Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G13890.1
PEP
AT4G13890.1
Position on the Genome Chromosome Chr4
Start Position 8032146
End Position 8033718
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00780770
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Serine hydroxymethyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Glycine hydroxymethyltransferase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00464
Pfam Description Details
InterPro ID
IPR015424,IPR015421,IPR015422,IPR039429,IPR001085
InterPro Description Details
GO ID
GO:0030170,GO:0004372,GO:0035999,GO:0019264
GO Description Details
GOslim ID
GO:0006725,GO:0006730,GO:0019842,GO:0043603,GO:0006082,GO:0043167,GO:0016740,GO:0006520,GO:0046483
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.