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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G10750.1
PEP
AT4G10750.1
Position on the Genome Chromosome Chr4
Start Position 6618724
End Position 6619800
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00128440
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
HpcH/HpaI aldolase/citrate lyase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
HpcH_HpaI domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03328
Pfam Description Details
InterPro ID
IPR005000,IPR040442,IPR015813
InterPro Description Details
GO ID
GO:0003824
GO Description Details
GOslim ID
GO:0003824
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
HpcH_HpaI domain-containing protein
OrthoDB(1 item)
229794at33090
HpcH/HpaI aldolase/citrate lyase domain
Pfam(1 item)
 
HpcH/HpaI aldolase/citrate lyase family
InterPro(3 items)
 
HpcH/HpaI aldolase/citrate lyase domain
 
Pyrv_Kinase-like_dom_sf
 
Pyrv/PenolPyrv_Kinase-like_dom
Gene ontology(1 item)
MF
catalytic activity
GO slim(1 item)
MF
catalytic activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.