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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G09020.1
PEP
AT4G09020.1
Position on the Genome Chromosome Chr4
Start Position 5784099
End Position 5788839
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00397867
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Glycoside hydrolase, family 13, N-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Aamy domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02922,PF00128
Pfam Description Details
InterPro ID
IPR013780,IPR004193,IPR006047,IPR014756,IPR017853,IPR013783
InterPro Description Details
GO ID
GO:0009507,GO:0005975,GO:0004553
GO Description Details
GOslim ID
GO:0005975,GO:0009536,GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Aamy domain-containing protein
OrthoDB(1 item)
50774at33090
Glycoside hydrolase, family 13, N-terminal
Pfam(2 items)
 
Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
 
Alpha amylase, catalytic domain
InterPro(6 items)
 
Glyco_hydro_b
 
Glycoside hydrolase, family 13, N-terminal
 
Glycosyl hydrolase, family 13, catalytic domain
 
Glycoside_hydrolase_SF
Gene ontology(3 items)
BP
carbohydrate metabolic process
MF
hydrolase activity, hydrolyzing O-glycosyl compounds
GO slim(3 items)
BP
carbohydrate metabolic process
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.