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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT4G03210.1
PEP
AT4G03210.1
Position on the Genome Chromosome Chr4
Start Position 1416019
End Position 1417197
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00388762
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Xyloglucan endotransglucosylase/hydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Xyloglucan endotransglucosylase/hydrolase protein 9
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00722,PF06955
Pfam Description Details
InterPro ID
IPR000757,IPR013320,IPR008264,IPR010713,IPR016455
InterPro Description Details
GO ID
GO:0004553,GO:0048046,GO:0005618,GO:0016762,GO:0042546,GO:0010411,GO:0071555
GO Description Details
GOslim ID
GO:0016740,GO:0005576,GO:0016787,GO:0005618,GO:0044085,GO:0071555,GO:0005976
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT4G03210
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Xyloglucan endotransglucosylase/hydrolase protein 9
OrthoDB(1 item)
134744at33090
Xyloglucan endotransglucosylase/hydrolase
Pfam(2 items)
 
Glycosyl hydrolases family 16
 
Xyloglucan endo-transglycosylase (XET) C-terminus
InterPro(5 items)
 
Glycoside hydrolase family 16
 
ConA-like_dom_sf
 
Beta_glucanase
 
Xyloglucan endo-transglycosylase, C-terminal
Gene ontology(7 items)
MF
hydrolase activity, hydrolyzing O-glycosyl compounds
MF
xyloglucan:xyloglucosyl transferase activity
BP
cell wall biogenesis
BP
xyloglucan metabolic process
BP
cell wall organization
GO slim(7 items)
MF
transferase activity
CC
extracellular region
MF
hydrolase activity
BP
cellular component biogenesis
BP
cell wall organization
BP
polysaccharide metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.