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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G63490.1
PEP
AT3G63490.1
Position on the Genome Chromosome Chr3
Start Position 23444269
End Position 23446020
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00396083
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ribosomal protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Ribosomal protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00687
Pfam Description Details
InterPro ID
IPR028364,IPR016095,IPR023674,IPR005878,IPR023673
InterPro Description Details
GO ID
GO:0006412,GO:0019843,GO:0015934,GO:0003735
GO Description Details
GOslim ID
GO:0005840,GO:0005198,GO:0003676,GO:1990904
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Ribosomal protein
OrthoDB(1 item)
160436at33090
Ribosomal protein
Pfam(1 item)
 
Ribosomal protein L1p/L10e family
InterPro(5 items)
 
Ribosomal protein L1/ribosomal biogenesis protein
 
Ribosomal_L1_3-a/b-sand
 
Ribosomal_L1-like
 
Ribosom_L1_bac-type
 
Ribosomal_L1_CS
Gene ontology(4 items)
CC
large ribosomal subunit
MF
structural constituent of ribosome
GO slim(4 items)
MF
structural molecule activity
MF
nucleic acid binding
CC
ribonucleoprotein complex

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.