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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G58140.1
PEP
AT3G58140.1
Position on the Genome Chromosome Chr3
Start Position 21529988
End Position 21532386
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00316469
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Ferrodoxin-fold anticodon-binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Phenylalanyl-tRNA synthetase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF03147,PF01409
Pfam Description Details
InterPro ID
IPR005121,IPR002319,IPR036690,IPR004530
InterPro Description Details
GO ID
GO:0005524,GO:0005759,GO:0006432,GO:0000049,GO:0004826
GO Description Details
GOslim ID
GO:0006520,GO:0003676,GO:0016070,GO:0016874,GO:0000166,GO:0005739,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Phenylalanyl-tRNA synthetase
OrthoDB(1 item)
124484at33090
Ferrodoxin-fold anticodon-binding domain
Pfam(2 items)
 
Ferredoxin-fold anticodon binding domain
 
tRNA synthetases class II core domain (F)
InterPro(4 items)
 
Ferrodoxin-fold anticodon-binding domain
 
Phenylalanyl-tRNA synthetase
 
Fdx_antiC-bd_sf
 
Phe-tRNA-synth_IIc_mito
Gene ontology(5 items)
CC
mitochondrial matrix
BP
phenylalanyl-tRNA aminoacylation
MF
phenylalanine-tRNA ligase activity
GO slim(7 items)
BP
cellular amino acid metabolic process
MF
nucleic acid binding
BP
RNA metabolic process
MF
ligase activity
MF
nucleotide binding
CC
mitochondrion

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.