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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G57150.1
PEP
AT3G57150.1
Position on the Genome Chromosome Chr3
Start Position 21154255
End Position 21155952
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00189795
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pseudouridine synthase, catalytic domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
H/ACA ribonucleoprotein complex subunit 4
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF08068,PF01509,PF01472,PF16198
Pfam Description Details
InterPro ID
IPR004802,IPR002501,IPR015947,IPR020103,IPR012960,IPR002478,IPR032819,IPR004521
InterPro Description Details
GO ID
GO:0009506,GO:1990481,GO:0031429,GO:0000495,GO:0031120,GO:0031118,GO:0005829,GO:0009982,GO:0005730,GO:0003723
GO Description Details
GOslim ID
GO:0055044,GO:0042254,GO:0005730,GO:0043412,GO:0016070,GO:0006396,GO:0003676,GO:0005737,GO:0005732,GO:0016853
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G57150
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.