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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G57050.1
PEP
AT3G57050.1
Position on the Genome Chromosome Chr3
Start Position 21111939
End Position 21114521
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00152531
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pyridoxal phosphate-dependent transferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Cystathionine beta-lyase, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01053
Pfam Description Details
InterPro ID
IPR015424,IPR015422,IPR000277,IPR006238,IPR015421
InterPro Description Details
GO ID
GO:0004123,GO:0047804,GO:0016846,GO:0019279,GO:0030170,GO:0009507,GO:0019343,GO:0005737,GO:0004121,GO:0009570,GO:0019346
GO Description Details
GOslim ID
GO:0043167,GO:0009536,GO:0006790,GO:0016829,GO:0006520,GO:0005737,GO:0019842
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G57050
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Cystathionine beta-lyase, chloroplastic
OrthoDB(1 item)
88134at33090
Pyridoxal phosphate-dependent transferase
Pfam(1 item)
 
Cys/Met metabolism PLP-dependent enzyme
InterPro(5 items)
 
PyrdxlP-dep_Trfase
 
PyrdxlP-dep_Trfase_dom1
 
Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
 
Cys_b_lyase_euk
 
PyrdxlP-dep_Trfase_major
Gene ontology(11 items)
MF
cystathionine gamma-lyase activity
MF
cysteine-S-conjugate beta-lyase activity
MF
carbon-sulfur lyase activity
BP
L-methionine biosynthetic process from L-homoserine via cystathionine
MF
pyridoxal phosphate binding
BP
cysteine biosynthetic process via cystathionine
MF
cystathionine beta-lyase activity
CC
chloroplast stroma
BP
transsulfuration
GO slim(7 items)
BP
sulfur compound metabolic process
MF
lyase activity
BP
cellular amino acid metabolic process
MF
vitamin binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.