Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G54840.1
PEP
AT3G54840.1
Position on the Genome Chromosome Chr3
Start Position 20318597
End Position 20320782
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00436673
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Small GTPase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Ras-related protein RABF1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00071
Pfam Description Details
InterPro ID
IPR027417,IPR001806,IPR005225
InterPro Description Details
GO ID
GO:0045022,GO:0005768,GO:0012505,GO:0005783,GO:0005769,GO:0006886,GO:0010009,GO:0005886,GO:0003924,GO:0005829,GO:0005525,GO:0006897,GO:0031901
GO Description Details
GOslim ID
GO:0016050,GO:0051641,GO:0005737,GO:0005783,GO:0001882,GO:0016192,GO:0005575,GO:0015031,GO:0016787,GO:0005768,GO:0061024,GO:0005773,GO:0016020,GO:0043167,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.