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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G54620.1
PEP
AT3G54620.1
Position on the Genome Chromosome Chr3
Start Position 20218085
End Position 20220341
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00988233
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Basic leucine-zipper, C-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Basic leucine zipper 25
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF12498,PF00170
Pfam Description Details
InterPro ID
IPR004827,IPR020983
InterPro Description Details
GO ID
GO:0005634,GO:0003677,GO:0003700,GO:0045735,GO:0046982,GO:2000693,GO:0045893
GO Description Details
GOslim ID
GO:0050789,GO:0000003,GO:0003676,GO:0006351,GO:0032502,GO:0065009,GO:0045735,GO:0005515,GO:0032501,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.