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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G48420.1
PEP
AT3G48420.1
Position on the Genome Chromosome Chr3
Start Position 17929743
End Position 17931551
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00181106
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Haloacid dehalogenase-like hydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF13419
Pfam Description Details
InterPro ID
IPR023198,IPR036412,IPR041492,IPR023214,IPR006439
InterPro Description Details
GO ID
GO:0016787
GO Description Details
GOslim ID
GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
136781at33090
Haloacid dehalogenase-like hydrolase
Pfam(1 item)
 
Haloacid dehalogenase-like hydrolase
InterPro(5 items)
 
PGP-like_dom2
 
HAD-SF_hydro_IA
Gene ontology(1 item)
MF
hydrolase activity
GO slim(1 item)
MF
hydrolase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.