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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G20330.1
PEP
AT3G20330.1
Position on the Genome Chromosome Chr3
Start Position 7090354
End Position 7091904
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00194120
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Aspartate/ornithine carbamoyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Aspartate carbamoyltransferase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF02729,PF00185
Pfam Description Details
InterPro ID
IPR036901,IPR006131,IPR006132,IPR006130,IPR002082
InterPro Description Details
GO ID
GO:0044205,GO:0004070,GO:0016597,GO:0006207,GO:0006520
GO Description Details
GOslim ID
GO:0009117,GO:0016597,GO:0016740,GO:0006139,GO:0006520
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Aspartate carbamoyltransferase
OrthoDB(1 item)
152325at33090
Aspartate/ornithine carbamoyltransferase
Pfam(2 items)
 
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
 
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
InterPro(5 items)
 
Asp/Orn_carbamoylTrfase_sf
 
Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
 
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
 
Asp/Orn_carbamoylTrfase
 
Asp_carbamoyltransf
Gene ontology(5 items)
BP
'de novo' UMP biosynthetic process
MF
aspartate carbamoyltransferase activity
MF
amino acid binding
BP
'de novo' pyrimidine nucleobase biosynthetic process
BP
cellular amino acid metabolic process
GO slim(5 items)
BP
nucleotide metabolic process
MF
amino acid binding
MF
transferase activity
BP
nucleobase-containing compound metabolic process
BP
cellular amino acid metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.