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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G14530.1
PEP
AT3G14530.1
Position on the Genome Chromosome Chr3
Start Position 4879293
End Position 4880448
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00407023
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Polyprenyl synthetase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Geranylgeranyl pyrophosphate synthase 9, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00348
Pfam Description Details
InterPro ID
IPR033749,IPR008949,IPR000092
InterPro Description Details
GO ID
GO:0033384,GO:0004311,GO:0009507,GO:0045337,GO:0016117,GO:0046872,GO:0004659,GO:0004337,GO:0004161,GO:0033386
GO Description Details
GOslim ID
GO:0043167,GO:0006793,GO:0044255,GO:0016740,GO:0009536,GO:0042440
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G14530
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Geranylgeranyl pyrophosphate synthase 9, chloroplastic
OrthoDB(1 item)
160460at33090
Polyprenyl synthetase
Pfam(1 item)
 
Polyprenyl synthetase
InterPro(3 items)
 
Polyprenyl_synt_CS
 
Isoprenoid_synthase_dom_sf
 
Polyprenyl synthetase
Gene ontology(10 items)
BP
geranyl diphosphate biosynthetic process
MF
farnesyltranstransferase activity
BP
farnesyl diphosphate biosynthetic process
BP
carotenoid biosynthetic process
MF
metal ion binding
MF
prenyltransferase activity
MF
geranyltranstransferase activity
MF
dimethylallyltranstransferase activity
BP
geranylgeranyl diphosphate biosynthetic process
GO slim(6 items)
BP
phosphorus metabolic process
BP
cellular lipid metabolic process
MF
transferase activity
BP
pigment metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.