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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G13180.1
PEP
AT3G13180.1
Position on the Genome Chromosome Chr3
Start Position 4236326
End Position 4239966
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00531921
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RNA (C5-cytosine) methyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
SAM_MT_RSMB_NOP domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01029,PF01189
Pfam Description Details
InterPro ID
IPR029063,IPR006027,IPR001678,IPR035926,IPR023267,IPR023268
InterPro Description Details
GO ID
GO:0006355,GO:0003723,GO:0008168,GO:0001510
GO Description Details
GOslim ID
GO:0006351,GO:0050789,GO:0016070,GO:0043412,GO:0016740,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.