Plant GARDEN How To ▶︎

JA

EN

Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT3G01150.1
PEP
AT3G01150.1
Position on the Genome Chromosome Chr3
Start Position 51732
End Position 54344
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00294539
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
PTBPH1/PTBPH2, RNA recognition motif 1
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Polypyrimidine tract-binding protein homolog 1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF11835,PF00076
Pfam Description Details
InterPro ID
IPR000504,IPR034792,IPR035979,IPR034793,IPR021790,IPR034794,IPR012677
InterPro Description Details
GO ID
GO:0000381,GO:0008380,GO:0006397,GO:0000932,GO:0005737,GO:0006417,GO:0043484,GO:0009845,GO:0003729,GO:0005634
GO Description Details
GOslim ID
GO:0032501,GO:0050789,GO:0005737,GO:0005634,GO:0032502,GO:0006396,GO:0043232,GO:0000375,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT3G01150
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.