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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G48110.1
PEP
AT2G48110.1
Position on the Genome Chromosome Chr2
Start Position 19673370
End Position 19679494
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00559941
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Mediator of RNA polymerase II transcription subunit 33A
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Mediator of RNA polymerase II transcription subunit 33B
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR039638
InterPro Description Details
GO ID
GO:0016592,GO:2000762,GO:0016020,GO:0009698
GO Description Details
GOslim ID
GO:0005634,GO:0006725,GO:0019748,GO:0016020,GO:0050789,GO:0005667
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Mediator of RNA polymerase II transcription subunit 33B
OrthoDB(1 item)
3581at33090
Mediator of RNA polymerase II transcription subunit 33A
InterPro(1 item)
Gene ontology(4 items)
CC
mediator complex
BP
regulation of phenylpropanoid metabolic process
BP
phenylpropanoid metabolic process
GO slim(6 items)
BP
cellular aromatic compound metabolic process
BP
secondary metabolic process
BP
regulation of biological process
CC
transcription regulator complex

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.