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Arabidopsis thaliana

Assembly Name:TAIR10

Gene File:Araport11_genes.201606.pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
AT2G45880.1
PEP
AT2G45880.1
Position on the Genome Chromosome Chr2
Start Position 18878674
End Position 18881824
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00180369
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Beta-amylase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Beta-amylase 7
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01373,PF05687
Pfam Description Details
InterPro ID
IPR001554,IPR008540,IPR017853,IPR018238
InterPro Description Details
GO ID
GO:0048831,GO:0005634,GO:0005737,GO:0102229,GO:0000272,GO:0003700
GO Description Details
GOslim ID
GO:0003676,GO:0050789,GO:0032502,GO:0005737,GO:0005634,GO:0006351,GO:0009057,GO:0016787,GO:0005976,GO:0065009,GO:0032501
GO slim Description Details
Transcription Factor (TF) family 
TF family Description
BES1 family protein
Best hit taxonomy Species Arabidopsis thaliana
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments ath:AT2G45880
gene , 遺伝子 , ecotype Col-0 , Brassicaceae , アブラナ科 , Arabidopsis , シロイヌナズナ属 , Thale cress , シロイヌナズナ Thale cress , シロイヌナズナ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Beta-amylase 7
OrthoDB(1 item)
28262at33090
Beta-amylase
Pfam(2 items)
 
Glycosyl hydrolase family 14
 
BES1/BZR1 plant transcription factor, N-terminal
InterPro(4 items)
 
Glycoside hydrolase, family 14
 
BES1/BZR1 plant transcription factor, N-terminal
 
Glycoside_hydrolase_SF
 
Glyco_hydro_14_CS
Gene ontology(6 items)
BP
regulation of shoot system development
MF
amylopectin maltohydrolase activity
BP
polysaccharide catabolic process
MF
DNA-binding transcription factor activity
GO slim(11 items)
MF
nucleic acid binding
BP
regulation of biological process
BP
developmental process
BP
transcription, DNA-templated
BP
macromolecule catabolic process
MF
hydrolase activity
BP
polysaccharide metabolic process
BP
regulation of molecular function
BP
multicellular organismal process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.